Os11g0587300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0587300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.37 | 0.61 | 3.52 | -1.04 | 1.56 | -1.73 | -3.45 | 3.98 | -0.199 | 11.2 | 20.42 | 505 | 0.299 | -- |
| 178.34 | 0.622 | 3.59 | -1.79 | 1.72 | -1.67 | -2.75 | -- | -0.402 | 11.1 | 18.24 | 520 | 0.223 | -- |
| 199.05 | 0.657 | 3.65 | -2.62 | 2.39 | -2.21 | -- | -3.57 | -0.632 | 10.6 | 11.84 | 509 | 0.503 | -- |
| 209.22 | 0.674 | 3.58 | -1.84 | 1.95 | -2 | -- | -- | -0.409 | 11.1 | 17.02 | 513 | 0.0651 | -- |
| 289.24 | 0.792 | 3.59 | -1.63 | -- | -1.04 | -- | 1.45 | -0.338 | -- | 19 | 1400 | 1.41 | -- |
| 220.14 | 0.696 | 3.68 | -2.13 | 0.958 | -- | -3.08 | -- | -0.72 | 10.7 | -- | -- | -- | -- |
| 259.34 | 0.754 | 3.69 | -2.26 | 0.972 | -- | -- | -- | -0.728 | 10.9 | -- | -- | -- | -- |
| 289.04 | 0.792 | 3.67 | -2.02 | -- | -0.966 | -- | -- | -0.508 | -- | 19 | 1304 | 0.54 | -- |
| 238.54 | 0.719 | 3.5 | -- | 0.938 | -2 | -- | -- | 0.11 | 10.8 | 2.916 | 47520 | 5.77 | -- |
| 318.08 | 0.833 | 3.71 | -2.28 | -- | -- | -- | -- | -0.735 | -- | -- | -- | -- | -- |
| 393.53 | 0.928 | 3.63 | -- | 0.992 | -- | -- | -- | -0.477 | 11.1 | -- | -- | -- | -- |
| 238.61 | 0.719 | 3.52 | -- | -- | -2.9 | -- | -- | 0.114 | -- | -109500 | 47520 | 7.17 | -- |
| 454.91 | 0.996 | 3.65 | -- | -- | -- | -- | -- | -0.482 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 4 | 164.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 37 | 172.17 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 38 | 172.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 43 | 172.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 79 | 174.91 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 94 | 175.40 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 188 | 178.02 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 194 | 178.12 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 228 | 178.83 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 236 | 179.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 321 | 181.21 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 2 |
| 439 | 183.55 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 7 |
| 443 | 183.61 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 1 |
| 472 | 184.13 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 594 | 186.18 | radiation | 1 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 596 | 186.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 618 | 186.32 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 643 | 186.60 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 659 | 186.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 676 | 187.05 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 682 | 187.12 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 695 | 187.27 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 795 | 188.42 | temperature | 20 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 825 | 188.67 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 834 | 188.74 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 835 | 188.75 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 838 | 188.78 | temperature | 20 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 851 | 188.90 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 867 | 188.99 | temperature | 20 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 874 | 189.02 | temperature | 25 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 876 | 189.02 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 883 | 189.04 | temperature | 25 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 891 | 189.07 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 955 | 189.18 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 998 | 189.24 | temperature | 20 | 14400 | > th | dose dependent | sin | 21 | NA |