Os11g0582300 - FiT-DB

Os11g0582300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GTP-binding protein-like; root hair defective 3 protein-like.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	9.81	(0.0221)	R²	:	0.313
β₁	:	1.07	(0.081)	R²_dD	:	0.275	R²_D	:	0.181
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.382	(0.0472)	R²_dN8	:	0.132	R²_N8	:	0.0385
σ	:	0.415
deviance	:	79
__

_____

C
peak time of C	:	--
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
59.74	0.363	9.8	1.03	0.246	0.639	-0.223	0.686	0.36	14.8	69	1246	--	--
60.26	0.362	9.81	0.944	0.253	0.683	-0.324	--	0.384	14.6	68.82	1230	--	--
59.86	0.36	9.8	1.03	0.254	0.644	--	0.75	0.36	14.6	69	1224	--	--
60.62	0.363	9.81	0.935	0.258	0.694	--	--	0.385	14.5	68.84	1217	--	--
63.05	0.37	9.8	1.02	--	0.578	--	0.663	0.388	--	69	1315	--	--
77.64	0.413	9.81	1.09	0.115	--	-0.454	--	0.388	15.4	--	--	--	--
78.17	0.414	9.81	1.08	0.125	--	--	--	0.385	16.8	--	--	--	--
63.85	0.372	9.81	0.941	--	0.615	--	--	0.38	--	68	1324	--	--
83.04	0.424	9.83	--	0.251	0.808	--	--	0.309	14.8	68.2	1241	--	--
79	0.415	9.81	1.07	--	--	--	--	0.382	--	--	--	--	--
108.87	0.488	9.84	--	0.106	--	--	--	0.265	17.1	--	--	--	--
86.23	0.432	9.83	--	--	0.749	--	--	0.277	--	68.37	1331	--	--
109.46	0.488	9.83	--	--	--	--	--	0.263	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	54.28	wind	9	43200	> th	dose independent	rect.	12	4
2	54.28	wind	9	43200	> th	dose dependent	rect.	12	4
6	54.53	wind	9	43200	> th	dose independent	rect.	12	2
7	54.53	wind	9	43200	> th	dose independent	rect.	14	2
18	54.94	wind	9	43200	< th	dose independent	rect.	11	5
42	55.92	wind	9	14400	< th	dose independent	rect.	18	19
43	55.93	wind	9	43200	> th	dose independent	rect.	3	12
48	56.01	wind	9	43200	> th	dose independent	rect.	24	15
52	56.04	wind	9	43200	> th	dose independent	rect.	11	9
54	56.08	wind	9	43200	< th	dose independent	rect.	3	12
60	56.15	wind	9	43200	< th	dose independent	rect.	24	15
64	56.18	wind	9	14400	> th	dose independent	rect.	19	18
74	56.26	wind	7	14400	> th	dose dependent	rect.	20	17
107	56.53	wind	9	43200	> th	dose dependent	rect.	11	9
166	57.08	wind	9	43200	> th	dose independent	rect.	19	21
175	57.16	wind	3	14400	> th	dose dependent	rect.	24	13
204	57.46	wind	1	14400	> th	dose dependent	rect.	3	1
205	57.48	wind	7	43200	> th	dose dependent	rect.	3	13
208	57.49	wind	9	14400	< th	dose dependent	rect.	3	1
212	57.51	wind	9	43200	> th	dose independent	sin	2	NA
224	57.56	radiation	40	43200	< th	dose independent	rect.	10	1
225	57.58	humidity	80	1440	< th	dose independent	rect.	7	2
230	57.61	wind	7	43200	> th	dose dependent	rect.	24	16
233	57.63	wind	9	43200	< th	dose independent	sin	2	NA
248	57.67	wind	9	43200	< th	dose independent	rect.	19	21
254	57.73	wind	9	43200	> th	dose independent	rect.	11	19
261	57.77	wind	9	43200	> th	dose independent	rect.	11	14
263	57.77	wind	1	43200	< th	dose dependent	rect.	18	12
305	58.00	wind	3	43200	< th	dose independent	rect.	2	1
315	58.04	wind	3	14400	> th	dose independent	rect.	3	1
324	58.06	wind	1	43200	< th	dose dependent	rect.	20	10
334	58.12	radiation	40	43200	> th	dose dependent	rect.	10	1
360	58.26	wind	3	14400	> th	dose dependent	sin	6	NA
369	58.28	humidity	80	43200	< th	dose dependent	rect.	3	4
373	58.30	wind	9	43200	< th	dose independent	rect.	11	19
387	58.36	wind	9	43200	< th	dose independent	rect.	11	14
413	58.42	wind	7	43200	> th	dose dependent	sin	2	NA
418	58.43	wind	9	43200	< th	dose independent	rect.	24	20
427	58.47	wind	3	43200	> th	dose independent	rect.	20	11
490	58.65	humidity	80	1440	> th	dose independent	rect.	7	2
515	58.73	radiation	40	43200	< th	dose independent	rect.	15	20
518	58.74	wind	9	14400	< th	dose independent	sin	8	NA
545	58.80	humidity	80	1440	< th	dose dependent	rect.	17	18
574	58.86	radiation	40	43200	> th	dose independent	rect.	10	1
575	58.86	wind	3	43200	< th	dose independent	rect.	20	11
592	58.90	radiation	10	43200	< th	dose independent	rect.	5	2
617	58.94	radiation	10	43200	< th	dose independent	rect.	17	15
625	58.95	wind	9	43200	> th	dose dependent	rect.	11	19
629	58.96	radiation	10	43200	< th	dose independent	rect.	1	6
630	58.96	radiation	10	43200	< th	dose independent	rect.	20	11
660	59.01	wind	3	43200	> th	dose independent	rect.	20	14
697	59.10	wind	5	14400	< th	dose independent	rect.	1	12
730	59.14	radiation	1	43200	> th	dose dependent	rect.	4	2
747	59.16	wind	1	43200	< th	dose dependent	rect.	2	1
748	59.16	humidity	80	43200	< th	dose dependent	rect.	21	10
750	59.17	wind	3	43200	> th	dose independent	rect.	6	1
756	59.18	wind	9	43200	> th	dose independent	no	NA	NA
758	59.18	wind	3	43200	< th	dose independent	rect.	21	8
785	59.21	wind	1	43200	< th	dose dependent	rect.	23	5
846	59.31	wind	3	43200	< th	dose independent	rect.	20	14
851	59.32	wind	3	43200	> th	dose independent	sin	8	NA
856	59.32	wind	1	43200	< th	dose dependent	sin	11	NA
858	59.33	wind	3	43200	> th	dose independent	rect.	23	15
901	59.39	wind	9	43200	> th	dose independent	rect.	13	23
953	59.45	wind	9	14400	< th	dose independent	rect.	14	23
967	59.48	wind	9	43200	< th	dose independent	no	NA	NA
968	59.48	wind	5	14400	> th	dose independent	rect.	1	12