Os11g0581900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0005 family protein.
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Os11g0581900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function UPF0005 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.95 | 0.602 | 7.21 | 5.21 | 2.16 | 2.08 | -2.55 | -9.46 | 1.27 | 15.7 | 21.87 | 5052 | -- | -- |
| 183.57 | 0.631 | 7.53 | 4.64 | 2.16 | 5.02 | -3.56 | -- | 0.858 | 15.5 | 19.05 | 9519 | -- | -- |
| 181.74 | 0.628 | 7.21 | 5.19 | 2.14 | 2.16 | -- | -9.52 | 1.26 | 15.9 | 21.9 | 5215 | -- | -- |
| 194.85 | 0.65 | 7.54 | 4.88 | 2.11 | 5.43 | -- | -- | 0.957 | 15.8 | 19 | 9594 | -- | -- |
| 420.53 | 0.955 | 7.25 | 5.05 | -- | 2.46 | -- | -8.27 | 1.18 | -- | 21.55 | 3980 | -- | -- |
| 488.54 | 1.04 | 7.7 | 2.14 | 2.21 | -- | -2.89 | -- | 0.173 | 15.6 | -- | -- | -- | -- |
| 513.48 | 1.06 | 7.71 | 2.09 | 2.21 | -- | -- | -- | 0.157 | 15.8 | -- | -- | -- | -- |
| 441.4 | 0.979 | 7.49 | 5.17 | -- | 5.74 | -- | -- | 1.07 | -- | 19.33 | 9711 | -- | -- |
| 544.11 | 1.09 | 7.75 | -- | 2.08 | 4.89 | -- | -- | 0.0333 | 15.8 | 17.57 | 1986 | -- | -- |
| 782.96 | 1.31 | 7.71 | 2 | -- | -- | -- | -- | 0.098 | -- | -- | -- | -- | -- |
| 628.43 | 1.17 | 7.77 | -- | 2.17 | -- | -- | -- | -0.0757 | 15.8 | -- | -- | -- | -- |
| 757.04 | 1.28 | 7.67 | -- | -- | 3.1 | -- | -- | 0.273 | -- | 22.7 | 1091 | -- | -- |
| 888.13 | 1.39 | 7.76 | -- | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.86 | temperature | 25 | 4320 | < th | dose dependent | rect. | 12 | 7 |
| 10 | 167.02 | temperature | 25 | 4320 | < th | dose dependent | rect. | 7 | 12 |
| 23 | 167.42 | temperature | 25 | 4320 | < th | dose dependent | sin | 22 | NA |
| 79 | 169.91 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 95 | 170.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 136 | 172.35 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 137 | 172.37 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 139 | 172.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 144 | 172.62 | humidity | 90 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 146 | 172.66 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 148 | 172.71 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 158 | 173.08 | wind | 9 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 174 | 173.40 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 178 | 173.54 | humidity | 90 | 43200 | < th | dose dependent | rect. | 23 | 10 |
| 216 | 174.26 | wind | 9 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 219 | 174.35 | humidity | 80 | 43200 | > th | dose independent | sin | 8 | NA |
| 226 | 174.39 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 229 | 174.44 | humidity | 50 | 43200 | < th | dose dependent | rect. | 10 | 7 |
| 231 | 174.51 | humidity | 90 | 43200 | < th | dose dependent | sin | 9 | NA |
| 233 | 174.51 | temperature | 20 | 4320 | < th | dose dependent | rect. | 14 | 19 |
| 302 | 175.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 370 | 175.52 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 381 | 175.53 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 23 |
| 386 | 175.57 | humidity | 50 | 43200 | < th | dose dependent | sin | 22 | NA |
| 408 | 175.62 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 23 |
| 426 | 175.71 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 432 | 175.74 | temperature | 20 | 4320 | < th | dose dependent | sin | 14 | NA |
| 488 | 175.90 | temperature | 20 | 4320 | < th | dose dependent | rect. | 6 | 23 |
| 591 | 176.25 | wind | 9 | 43200 | > th | dose dependent | rect. | 21 | 7 |
| 627 | 176.40 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 699 | 176.66 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 722 | 176.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 755 | 176.86 | humidity | 50 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 797 | 177.19 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 830 | 177.33 | humidity | 50 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 869 | 177.61 | wind | 9 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 984 | 178.36 | wind | 9 | 43200 | > th | dose dependent | rect. | 22 | 1 |