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Os11g0572400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ST3GAL-I sialyltransferase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.98 (0.0134) R2 : 0.579
β1 : -0.856 (0.0489) R2dD : 0.294 R2D : 0.273
β2 : 0.584 (0.0326) R2dC : 0.299 R2C : 0.292
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0544 (0.0285) R2dN8 : 0.00451 R2N8 : -0.0103
σ : 0.251
deviance : 28.76
__
_____
C
peak time of C : 21.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.72 0.234 10 -1.27 0.592 -0.0504 0.262 -2.36 -0.148 21.9 26.6 3281 -- --
25.55 0.235 9.99 -0.784 0.588 -0.319 0.315 -- -0.12 21.8 29.1 4239 -- --
24.97 0.233 10 -1.26 0.592 -0.0502 -- -2.31 -0.142 21.8 26.9 3257 -- --
25.66 0.236 9.99 -0.776 0.599 -0.302 -- -- -0.104 21.8 29.4 4265 -- --
45.4 0.314 10.1 -1.54 -- 0.133 -- -3.31 -0.187 -- 26.66 3095 -- --
28.61 0.251 9.98 -0.849 0.584 -- 0.206 -- -0.0543 21.7 -- -- -- --
28.76 0.251 9.98 -0.856 0.584 -- -- -- -0.0544 21.7 -- -- -- --
45.65 0.315 9.94 -0.741 -- -0.284 -- -- 0.0474 -- 29.77 11716 -- --
27.83 0.246 9.91 -- 0.595 -0.677 -- -- 0.275 21.8 18.3 47520 -- --
49.02 0.327 9.97 -0.851 -- -- -- -- -0.0554 -- -- -- -- --
48.08 0.324 9.96 -- 0.583 -- -- -- 0.0409 21.6 -- -- -- --
48.92 0.326 9.89 -- -- -0.662 -- -- 0.266 -- 17.9 47520 -- --
68.12 0.385 9.94 -- -- -- -- -- 0.039 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.82 radiation 1.0 1440 < th dose dependent rect. 18 11
2 24.00 radiation 1.0 1440 < th dose dependent rect. 18 9
4 24.03 radiation 1.0 1440 < th dose dependent rect. 18 7
6 24.05 radiation 1.0 1440 < th dose independent rect. 18 11
7 24.05 radiation 1.0 1440 < th dose dependent rect. 18 1
9 24.05 radiation 1.0 1440 < th dose dependent rect. 18 4
10 24.06 radiation 1.0 1440 > th dose independent rect. 18 1
20 24.07 radiation 1.0 1440 < th dose independent rect. 18 9
25 24.10 radiation 1.0 1440 < th dose independent rect. 18 2
26 24.10 radiation 1.0 1440 < th dose independent rect. 18 7
32 24.16 wind 1.0 43200 < th dose independent rect. 3 2
35 24.22 wind 1.0 43200 < th dose dependent rect. 3 6
38 24.27 wind 1.0 43200 < th dose dependent rect. 3 4
39 24.30 wind 1.0 43200 > th dose independent rect. 3 6
40 24.32 wind 1.0 43200 > th dose independent rect. 3 2
41 24.34 wind 1.0 43200 > th dose independent rect. 24 7
42 24.35 wind 1.0 43200 < th dose independent rect. 24 7
45 24.39 wind 1.0 43200 > th dose independent rect. 3 4
49 24.41 radiation 10.0 43200 > th dose independent rect. 9 1
51 24.41 wind 1.0 43200 < th dose dependent rect. 1 6
54 24.43 temperature 30.0 14400 < th dose independent rect. 18 15
57 24.44 wind 1.0 43200 > th dose independent rect. 24 9
60 24.45 precipitation 0.1 43200 > th dose dependent rect. 8 12
65 24.48 wind 1.0 43200 < th dose independent rect. 1 4
71 24.49 precipitation 0.1 43200 > th dose dependent sin 22 NA
74 24.51 wind 1.0 43200 < th dose independent rect. 3 4
80 24.52 radiation 1.0 4320 < th dose independent rect. 18 16
82 24.53 radiation 1.0 4320 < th dose independent rect. 18 18
84 24.53 precipitation 0.1 43200 > th dose dependent rect. 13 17
101 24.56 radiation 1.0 4320 < th dose independent rect. 18 21
104 24.56 precipitation 0.1 43200 > th dose dependent rect. 8 22
106 24.57 precipitation 0.1 43200 > th dose independent rect. 13 5
118 24.58 precipitation 0.1 43200 < th dose independent rect. 13 5
124 24.58 radiation 1.0 4320 > th dose independent rect. 18 19
125 24.58 precipitation 0.1 43200 < th dose dependent rect. 13 5
131 24.59 precipitation 0.1 43200 > th dose independent rect. 7 14
132 24.59 radiation 1.0 4320 > th dose independent rect. 18 16
134 24.59 radiation 1.0 4320 > th dose independent rect. 18 21
147 24.60 precipitation 0.1 43200 > th dose independent rect. 13 8
148 24.60 precipitation 0.1 43200 < th dose independent rect. 7 14
151 24.60 precipitation 0.1 43200 < th dose dependent rect. 7 14
158 24.61 wind 1.0 43200 < th dose independent rect. 3 6
160 24.61 precipitation 0.1 43200 < th dose independent rect. 13 8
164 24.61 precipitation 0.1 43200 > th dose dependent sin 14 NA
167 24.61 precipitation 0.1 43200 < th dose dependent rect. 13 8
168 24.61 precipitation 0.1 43200 > th dose dependent rect. 13 13
210 24.64 temperature 30.0 14400 < th dose independent rect. 18 2
212 24.64 temperature 30.0 14400 < th dose independent rect. 18 5
243 24.65 temperature 30.0 14400 < th dose independent rect. 18 8
245 24.65 temperature 30.0 14400 < th dose independent rect. 18 10
249 24.65 precipitation 0.1 43200 > th dose dependent rect. 19 3
284 24.67 precipitation 0.1 43200 > th dose independent sin 22 NA
285 24.67 precipitation 0.1 43200 < th dose independent sin 22 NA
291 24.67 precipitation 0.1 43200 > th dose independent rect. 8 10
296 24.67 temperature 30.0 14400 > th dose independent rect. 18 15
298 24.67 precipitation 0.1 43200 < th dose dependent sin 22 NA
317 24.68 precipitation 0.1 43200 > th dose dependent rect. 19 5
330 24.68 temperature 30.0 14400 > th dose dependent rect. 18 16
358 24.70 precipitation 0.1 43200 > th dose independent rect. 13 17
359 24.70 precipitation 0.1 43200 < th dose independent rect. 13 17
371 24.70 precipitation 0.1 43200 < th dose dependent rect. 13 17
399 24.72 precipitation 0.1 43200 > th dose dependent rect. 24 23
407 24.73 precipitation 0.1 43200 > th dose dependent rect. 19 10
435 24.74 precipitation 0.1 43200 > th dose dependent rect. 11 23
444 24.75 temperature 25.0 14400 > th dose dependent rect. 19 3
469 24.76 precipitation 0.1 43200 > th dose dependent no NA NA
470 24.76 temperature 25.0 14400 > th dose dependent rect. 19 1
497 24.77 precipitation 0.1 43200 > th dose dependent rect. 15 2
565 24.79 precipitation 0.1 43200 > th dose independent rect. 8 22
566 24.79 precipitation 0.1 43200 < th dose independent rect. 8 22
575 24.79 precipitation 0.1 43200 < th dose dependent rect. 8 22
578 24.80 temperature 30.0 14400 > th dose independent rect. 18 1
619 24.81 wind 1.0 43200 < th dose independent sin 8 NA
623 24.81 precipitation 0.1 43200 > th dose independent rect. 15 2
624 24.81 precipitation 0.1 43200 < th dose independent rect. 15 2
644 24.81 temperature 10.0 14400 > th dose dependent rect. 20 1
646 24.81 temperature 30.0 14400 < th dose dependent rect. 20 1
650 24.81 precipitation 0.1 43200 < th dose dependent rect. 15 2
665 24.81 precipitation 0.1 43200 > th dose dependent rect. 16 23
666 24.81 precipitation 0.1 43200 > th dose dependent rect. 20 23
668 24.82 precipitation 0.1 43200 > th dose independent sin 14 NA
670 24.82 precipitation 0.1 43200 < th dose independent sin 14 NA
673 24.82 precipitation 0.1 43200 > th dose independent rect. 19 3
674 24.82 precipitation 0.1 43200 < th dose independent rect. 19 3
697 24.82 precipitation 0.1 43200 < th dose dependent sin 14 NA
705 24.82 precipitation 0.1 43200 < th dose dependent rect. 19 3
751 24.83 temperature 10.0 4320 > th dose dependent rect. 8 2
780 24.84 temperature 30.0 4320 < th dose independent rect. 23 10
781 24.84 radiation 1.0 4320 < th dose independent rect. 5 10
789 24.84 radiation 1.0 4320 < th dose independent rect. 3 12
815 24.84 temperature 30.0 4320 < th dose dependent rect. 8 1
817 24.84 radiation 10.0 4320 < th dose dependent rect. 5 6
818 24.84 radiation 10.0 4320 < th dose dependent rect. 2 9
830 24.84 radiation 10.0 4320 < th dose dependent rect. 19 16
839 24.85 radiation 1.0 4320 < th dose independent rect. 5 8
845 24.85 radiation 1.0 4320 > th dose independent rect. 5 10
861 24.85 temperature 25.0 4320 > th dose dependent rect. 8 1
896 24.86 radiation 1.0 4320 > th dose independent rect. 5 8
961 24.87 radiation 1.0 4320 < th dose independent sin 5 NA
987 24.87 wind 3.0 14400 < th dose dependent rect. 20 1
990 24.87 precipitation 0.1 43200 > th dose dependent rect. 13 4