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Os11g0568500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Prefoldin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0166) R2 : 0.558
β1 : 0.887 (0.0608) R2dD : 0.215 R2D : 0.174
β2 : 0.811 (0.0418) R2dC : 0.366 R2C : 0.343
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.153 (0.0354) R2dN8 : 0.0241 R2N8 : -0.00994
σ : 0.312
deviance : 44.38
__
_____
C
peak time of C : 15.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.87 0.3 11.4 0.907 0.797 0.305 0.29 -0.73 0.198 15.8 19.6 2750 -- --
41.76 0.301 11.4 0.903 0.797 0.304 0.265 -- 0.198 15.8 19.57 2751 -- --
41.06 0.298 11.4 0.916 0.796 0.311 -- -0.696 0.202 15.9 19.6 2683 -- --
41.92 0.302 11.4 0.9 0.798 0.282 -- -- 0.2 15.8 19.6 2751 -- --
67.45 0.385 11.4 0.841 -- -0.407 -- -0.11 0.143 -- 19.26 2746 -- --
44.15 0.311 11.4 0.882 0.811 -- 0.276 -- 0.151 15.6 -- -- -- --
44.38 0.312 11.4 0.887 0.811 -- -- -- 0.153 15.6 -- -- -- --
67.52 0.384 11.4 0.847 -- -0.408 -- -- 0.144 -- 19.26 2746 -- --
55.85 0.348 11.4 -- 0.775 0.305 -- -- 0.115 16 9.613 30754 -- --
81 0.421 11.4 0.853 -- -- -- -- 0.131 -- -- -- -- --
65.11 0.377 11.4 -- 0.794 -- -- -- 0.0537 15.6 -- -- -- --
85.44 0.431 11.4 -- -- 0.705 -- -- 0.0214 -- 9.372 47520 -- --
100.19 0.467 11.4 -- -- -- -- -- 0.0363 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.89 temperature 10.0 90 > th dose dependent rect. 8 19
2 34.26 temperature 10.0 10 > th dose dependent rect. 9 18
5 34.63 wind 5.0 90 < th dose independent rect. 3 5
6 34.63 precipitation 0.1 90 < th dose independent rect. 8 19
7 34.63 precipitation 0.1 90 < th dose dependent rect. 8 19
8 34.70 wind 9.0 90 < th dose independent rect. 8 19
10 34.82 wind 9.0 270 < th dose independent rect. 5 22
12 34.83 wind 5.0 270 < th dose independent rect. 3 2
15 34.91 precipitation 0.1 90 < th dose independent rect. 3 5
16 34.91 precipitation 0.1 90 < th dose dependent rect. 3 5
19 34.94 temperature 10.0 90 > th dose independent rect. 3 5
21 34.94 temperature 30.0 90 < th dose independent rect. 3 5
22 34.94 humidity 50.0 90 > th dose independent rect. 3 5
24 34.94 atmosphere 995.0 90 > th dose independent rect. 3 5
25 34.94 atmosphere 1015.0 90 < th dose independent rect. 3 5
26 34.94 temperature 10.0 90 > th dose independent rect. 8 19
28 35.01 radiation 40.0 90 < th dose independent rect. 3 5
29 35.07 radiation 1.0 270 < th dose dependent rect. 3 2
30 35.08 precipitation 0.1 270 < th dose independent rect. 3 2
31 35.08 precipitation 0.1 270 < th dose dependent rect. 3 2
32 35.08 wind 9.0 90 < th dose dependent rect. 3 5
36 35.13 temperature 10.0 270 > th dose independent rect. 3 2
38 35.13 temperature 30.0 270 < th dose independent rect. 3 2
39 35.13 humidity 50.0 270 > th dose independent rect. 3 2
42 35.13 atmosphere 995.0 270 > th dose independent rect. 3 2
43 35.13 atmosphere 1010.0 270 < th dose independent rect. 3 2
45 35.13 radiation 20.0 270 < th dose independent rect. 3 2
48 35.13 temperature 10.0 270 > th dose independent rect. 5 22
49 35.14 radiation 30.0 270 < th dose dependent rect. 3 2
55 35.18 radiation 1.0 270 < th dose independent rect. 3 2
58 35.30 precipitation 0.1 270 < th dose independent rect. 5 22
59 35.30 precipitation 0.1 270 < th dose dependent rect. 5 22
63 35.40 atmosphere 995.0 90 > th dose independent rect. 8 19
64 35.40 temperature 10.0 270 > th dose dependent rect. 9 1
66 35.41 temperature 10.0 90 > th dose dependent rect. 8 6
67 35.43 wind 9.0 270 < th dose dependent rect. 3 2
68 35.47 wind 9.0 270 < th dose independent rect. 6 20
71 35.53 wind 9.0 10 < th dose independent rect. 9 18
73 35.55 wind 5.0 10 < th dose independent rect. 3 6
74 35.55 precipitation 0.1 10 < th dose independent rect. 9 18
76 35.55 precipitation 0.1 10 < th dose dependent rect. 9 18
77 35.57 humidity 50.0 270 > th dose dependent rect. 3 2
84 35.64 precipitation 0.1 270 < th dose independent rect. 6 20
85 35.64 temperature 10.0 270 > th dose dependent rect. 6 7
86 35.64 wind 9.0 90 < th dose dependent rect. 8 19
87 35.64 precipitation 0.1 270 < th dose dependent rect. 6 20
89 35.67 temperature 10.0 90 > th dose dependent rect. 3 5
106 35.70 temperature 10.0 270 > th dose independent rect. 6 20
120 35.75 radiation 40.0 270 < th dose dependent rect. 2 4
121 35.75 temperature 10.0 10 > th dose dependent rect. 9 5
123 35.76 temperature 10.0 10 > th dose independent rect. 3 6
125 35.76 temperature 30.0 10 < th dose independent rect. 3 6
126 35.76 humidity 50.0 10 > th dose independent rect. 3 6
128 35.76 atmosphere 995.0 10 > th dose independent rect. 3 6
129 35.76 atmosphere 1015.0 10 < th dose independent rect. 3 6
130 35.76 temperature 10.0 10 > th dose independent rect. 9 18
133 35.76 radiation 1.0 270 < th dose dependent rect. 3 15
135 35.78 precipitation 0.1 10 < th dose independent rect. 3 6
136 35.78 humidity 50.0 270 > th dose independent rect. 6 7
139 35.78 precipitation 0.1 10 < th dose dependent rect. 3 6
143 35.79 humidity 50.0 90 > th dose independent rect. 8 6
145 35.79 precipitation 0.1 90 < th dose independent rect. 8 6
147 35.79 wind 9.0 10 < th dose dependent rect. 3 6
149 35.79 precipitation 0.1 90 < th dose dependent rect. 8 6
153 35.84 wind 9.0 270 < th dose dependent rect. 6 7
163 35.85 humidity 50.0 270 > th dose independent rect. 14 16
180 35.88 temperature 10.0 90 > th dose independent rect. 8 6
181 35.88 atmosphere 995.0 90 > th dose independent rect. 8 6
182 35.88 atmosphere 1015.0 90 < th dose independent rect. 8 6
183 35.88 wind 9.0 270 < th dose independent rect. 6 7
184 35.88 temperature 10.0 90 > th dose independent rect. 14 18
186 35.89 wind 9.0 90 < th dose independent rect. 8 6
188 35.90 radiation 1.0 90 > th dose independent rect. 8 6
192 35.92 radiation 1.0 270 < th dose independent rect. 2 16
206 35.95 precipitation 0.1 270 < th dose independent rect. 6 7
209 35.95 temperature 10.0 270 > th dose dependent rect. 7 4
211 35.95 precipitation 0.1 270 < th dose dependent rect. 6 7
214 35.96 temperature 10.0 270 > th dose independent rect. 6 7
215 35.96 atmosphere 995.0 270 > th dose independent rect. 6 7
217 35.96 atmosphere 1015.0 270 < th dose independent rect. 6 7
224 35.98 radiation 40.0 90 < th dose independent rect. 14 18
238 36.00 atmosphere 1015.0 90 < th dose independent rect. 14 18
241 36.01 temperature 10.0 270 > th dose dependent rect. 3 2
250 36.03 atmosphere 995.0 90 > th dose dependent rect. 3 5
270 36.05 radiation 1.0 10 > th dose independent rect. 9 5
272 36.06 humidity 50.0 10 > th dose independent rect. 9 5
275 36.06 wind 9.0 270 < th dose dependent rect. 6 20
328 36.12 atmosphere 995.0 10 > th dose independent rect. 9 18
332 36.13 wind 1.0 270 > th dose independent rect. 3 1
335 36.13 temperature 10.0 10 > th dose independent rect. 9 5
337 36.13 atmosphere 995.0 10 > th dose independent rect. 9 5
338 36.13 atmosphere 1015.0 10 < th dose independent rect. 9 5
339 36.13 precipitation 0.1 10 < th dose independent rect. 9 5
340 36.13 temperature 10.0 10 > th dose independent rect. 14 19
343 36.13 precipitation 0.1 10 < th dose dependent rect. 9 5
353 36.15 humidity 50.0 90 > th dose dependent rect. 3 5
370 36.16 wind 9.0 90 < th dose independent rect. 14 18
371 36.16 atmosphere 1015.0 10 < th dose independent rect. 14 19
375 36.17 precipitation 0.1 270 < th dose independent rect. 17 9
385 36.17 precipitation 0.1 270 < th dose dependent rect. 17 9
416 36.20 wind 9.0 10 < th dose independent rect. 9 5
422 36.21 temperature 10.0 1440 > th dose independent rect. 4 6
425 36.21 atmosphere 995.0 1440 > th dose independent rect. 4 6
426 36.21 atmosphere 1015.0 1440 < th dose independent rect. 4 6
428 36.21 temperature 10.0 1440 > th dose independent rect. 10 18
437 36.22 wind 9.0 270 < th dose independent rect. 17 9
472 36.25 wind 9.0 270 < th dose dependent rect. 8 2
483 36.26 wind 9.0 270 < th dose dependent rect. 7 4
491 36.28 humidity 50.0 270 > th dose independent rect. 9 1
497 36.28 temperature 10.0 270 > th dose independent rect. 17 9
498 36.28 radiation 20.0 270 < th dose independent rect. 17 9
501 36.28 temperature 10.0 270 > th dose independent rect. 2 15
502 36.28 atmosphere 1015.0 270 < th dose independent rect. 2 15
518 36.31 atmosphere 995.0 90 > th dose independent rect. 14 18
523 36.32 radiation 1.0 270 > th dose independent rect. 6 7
526 36.32 humidity 50.0 10 > th dose independent rect. 14 19
527 36.33 wind 9.0 270 < th dose independent rect. 9 1
528 36.33 precipitation 0.1 270 < th dose independent rect. 9 1
534 36.33 precipitation 0.1 270 < th dose dependent rect. 9 1
536 36.34 temperature 10.0 270 > th dose independent rect. 9 1
537 36.34 atmosphere 995.0 270 > th dose independent rect. 9 1
538 36.34 atmosphere 1015.0 270 < th dose independent rect. 9 1
540 36.34 radiation 1.0 270 > th dose independent rect. 17 21
541 36.34 temperature 10.0 270 > th dose independent rect. 10 23
542 36.34 temperature 30.0 270 < th dose dependent rect. 3 2
562 36.35 temperature 10.0 1440 > th dose independent rect. 10 5
569 36.35 temperature 10.0 1440 > th dose independent rect. 15 19
595 36.38 wind 1.0 270 > th dose independent rect. 1 5
596 36.38 wind 1.0 90 > th dose independent rect. 8 6
599 36.38 precipitation 0.1 270 < th dose independent rect. 13 17
602 36.38 precipitation 0.1 270 < th dose dependent rect. 13 17
615 36.41 precipitation 0.1 270 < th dose independent rect. 2 15
618 36.41 temperature 10.0 10 > th dose dependent rect. 3 6
619 36.41 precipitation 0.1 270 < th dose dependent rect. 2 15
620 36.42 wind 1.0 10 > th dose independent rect. 9 5
651 36.44 wind 1.0 270 > th dose independent rect. 13 17
659 36.45 radiation 1.0 270 < th dose independent rect. 2 10
687 36.47 wind 9.0 10 < th dose independent rect. 14 19
709 36.49 atmosphere 995.0 270 > th dose dependent rect. 3 2
711 36.49 radiation 40.0 270 < th dose dependent rect. 17 9
718 36.51 radiation 1.0 270 > th dose independent rect. 9 1
725 36.52 precipitation 0.1 10 < th dose independent rect. 14 19
728 36.52 precipitation 0.1 10 < th dose dependent rect. 14 19
747 36.54 atmosphere 995.0 10 > th dose independent rect. 14 19
772 36.55 radiation 40.0 10 < th dose independent rect. 14 19
783 36.57 atmosphere 995.0 270 > th dose independent rect. 17 9
801 36.59 atmosphere 995.0 10 > th dose dependent rect. 3 6
824 36.61 wind 1.0 270 > th dose independent rect. 9 1
844 36.61 atmosphere 995.0 270 > th dose independent rect. 6 20
848 36.62 atmosphere 1005.0 90 > th dose independent rect. 3 5
860 36.63 atmosphere 1015.0 90 < th dose independent rect. 8 19
887 36.66 radiation 1.0 270 > th dose independent sin 3 NA
890 36.66 wind 9.0 270 < th dose independent rect. 2 15
894 36.66 atmosphere 1015.0 270 < th dose dependent rect. 3 2
897 36.67 wind 9.0 1440 < th dose independent rect. 4 5
902 36.67 humidity 50.0 1440 > th dose independent rect. 4 5
967 36.73 humidity 90.0 90 < th dose independent rect. 8 6
968 36.73 temperature 30.0 90 < th dose independent rect. 3 16
974 36.74 precipitation 0.1 90 < th dose independent rect. 19 8
980 36.74 precipitation 0.1 90 < th dose dependent rect. 19 8