Os11g0551900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Growth-regulating factor 8.
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Os11g0551900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Growth-regulating factor 8.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.41 | 0.595 | 6.18 | -0.784 | 0.54 | -0.198 | 0.923 | -4.04 | 0.136 | 1.96 | 1007 | 18579 | -- | -- |
| 174.27 | 0.615 | 6.13 | -0.569 | 0.531 | -0.844 | 1.09 | -- | 0.111 | 1.89 | 999.9 | 11502 | -- | -- |
| 161.42 | 0.592 | 6.21 | -1.24 | 0.55 | -0.212 | -- | -4.39 | 0.0467 | 1.86 | 1013 | 17981 | -- | -- |
| 176.87 | 0.619 | 6.16 | -0.584 | 0.546 | -0.854 | -- | -- | 0.0721 | 1.79 | 1000 | 11130 | -- | -- |
| 179.96 | 0.625 | 6.21 | -1.21 | -- | -0.266 | -- | -4.39 | 0.0567 | -- | 1013 | 18562 | -- | -- |
| 191 | 0.648 | 6.14 | -0.721 | 0.551 | -- | 0.911 | -- | 0.152 | 2 | -- | -- | -- | -- |
| 194.14 | 0.652 | 6.15 | -0.748 | 0.551 | -- | -- | -- | 0.147 | 1.8 | -- | -- | -- | -- |
| 194.59 | 0.65 | 6.16 | -0.555 | -- | -0.866 | -- | -- | 0.0794 | -- | 1000 | 11545 | -- | -- |
| 185.5 | 0.634 | 6.15 | -- | 0.532 | -0.957 | -- | -- | 0.123 | 1.73 | 1000 | 11184 | -- | -- |
| 212.53 | 0.681 | 6.14 | -0.726 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 208.89 | 0.676 | 6.13 | -- | 0.537 | -- | -- | -- | 0.231 | 1.76 | -- | -- | -- | -- |
| 202.31 | 0.662 | 6.15 | -- | -- | -0.97 | -- | -- | 0.127 | -- | 1000 | 11736 | -- | -- |
| 226.43 | 0.702 | 6.12 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.49 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 153.86 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 3 | 154.25 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 8 | 154.48 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 13 | 154.70 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 16 | 154.82 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 24 | 155.06 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 67 | 157.29 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 109 | 158.29 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 117 | 158.41 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 132 | 158.62 | humidity | 90 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 147 | 158.86 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 151 | 158.93 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 177 | 159.19 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 189 | 159.35 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 235 | 159.58 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 237 | 159.60 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 240 | 159.61 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 276 | 159.70 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 314 | 159.79 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 330 | 159.83 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 353 | 159.87 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 6 | 9 |
| 380 | 159.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 388 | 159.92 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 2 | NA |
| 469 | 160.02 | wind | 7 | 14400 | > th | dose independent | sin | 20 | NA |
| 488 | 160.05 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 497 | 160.06 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 558 | 160.13 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 3 | NA |
| 665 | 160.24 | wind | 7 | 14400 | < th | dose independent | sin | 20 | NA |
| 830 | 160.41 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 845 | 160.42 | atmosphere | 1010 | 14400 | > th | dose independent | sin | 10 | NA |
| 877 | 160.44 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 957 | 160.49 | atmosphere | 1015 | 14400 | < th | dose dependent | no | NA | NA |
| 977 | 160.50 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 994 | 160.52 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 20 | 11 |