Os11g0551800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Yippee-like protein 1 (DGL-1) (Mdgl-1).
FiT-DB / Search/ Help/ Sample detail
|
Os11g0551800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Yippee-like protein 1 (DGL-1) (Mdgl-1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.06 | 0.41 | 11.1 | -1.93 | 0.888 | 0.0231 | 0.321 | 4.07 | 0.165 | 16.2 | 0.006363 | 8765 | -- | -- |
| 86.27 | 0.436 | 11 | -1.11 | 1.39 | 0.728 | 0.169 | -- | 0.383 | 14.3 | 20 | 22527 | -- | -- |
| 75.81 | 0.406 | 11.1 | -1.95 | 0.888 | 0.192 | -- | 4.35 | 0.174 | 16.2 | 0.0001041 | 8636 | -- | -- |
| 83.72 | 0.429 | 11 | -1.09 | 1.3 | 0.805 | -- | -- | 0.387 | 14.6 | 40 | 22609 | -- | -- |
| 117.83 | 0.506 | 11.1 | -2.01 | -- | 0.375 | -- | 4.82 | 0.174 | -- | 0.01 | 8600 | -- | -- |
| 95.84 | 0.459 | 11 | -1.13 | 0.894 | -- | 0.143 | -- | 0.383 | 16.2 | -- | -- | -- | -- |
| 95.9 | 0.459 | 11 | -1.13 | 0.894 | -- | -- | -- | 0.383 | 16.2 | -- | -- | -- | -- |
| 126.58 | 0.524 | 10.9 | -1.29 | -- | 0.607 | -- | -- | 0.568 | -- | 60 | 22917 | -- | -- |
| 108.96 | 0.486 | 10.9 | -- | 0.897 | 0.75 | -- | -- | 0.807 | 16.2 | 4.729 | 47520 | -- | -- |
| 139.2 | 0.551 | 11 | -1.16 | -- | -- | -- | -- | 0.36 | -- | -- | -- | -- | -- |
| 129.34 | 0.532 | 10.9 | -- | 0.916 | -- | -- | -- | 0.509 | 16.2 | -- | -- | -- | -- |
| 152.42 | 0.575 | 10.9 | -- | -- | 0.787 | -- | -- | 0.799 | -- | 4.6 | 47520 | -- | -- |
| 174.84 | 0.617 | 10.9 | -- | -- | -- | -- | -- | 0.489 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.12 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 8 | 67.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 14 | 68.21 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 15 | 68.37 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 20 | 68.92 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 24 | 69.03 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 41 | 70.00 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 51 | 70.29 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 54 | 70.44 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 64 | 70.68 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 17 |
| 65 | 70.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 70 | 70.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 15 |
| 71 | 70.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 79 | 71.02 | radiation | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 80 | 71.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 87 | 71.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 89 | 71.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 91 | 71.24 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 19 |
| 94 | 71.33 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 96 | 71.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 98 | 71.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 103 | 71.49 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 104 | 71.52 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 7 |
| 121 | 71.74 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 128 | 71.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 129 | 71.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 130 | 71.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 131 | 71.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 132 | 71.80 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 138 | 71.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 139 | 71.80 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 144 | 71.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 9 |
| 146 | 71.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 147 | 71.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 11 |
| 150 | 71.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 157 | 71.90 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 166 | 71.93 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 168 | 71.94 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 171 | 71.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 178 | 72.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 181 | 72.01 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 190 | 72.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 255 | 72.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 259 | 72.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 260 | 72.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 262 | 72.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 269 | 72.43 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 275 | 72.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 17 |
| 277 | 72.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 284 | 72.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 285 | 72.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 7 |
| 286 | 72.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 287 | 72.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 312 | 72.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 322 | 72.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 325 | 72.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 329 | 72.66 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 334 | 72.67 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 335 | 72.68 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 342 | 72.69 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 11 |
| 348 | 72.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 361 | 72.76 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 368 | 72.80 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 396 | 72.88 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 399 | 72.90 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 407 | 72.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 418 | 73.01 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 439 | 73.09 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 15 |
| 461 | 73.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 480 | 73.24 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 495 | 73.25 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 498 | 73.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 501 | 73.27 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 502 | 73.27 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 509 | 73.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 17 |
| 512 | 73.29 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 543 | 73.35 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 22 |
| 551 | 73.38 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 561 | 73.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 564 | 73.41 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 593 | 73.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 595 | 73.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 611 | 73.60 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 612 | 73.61 | radiation | 10.0 | 30 | < th | dose independent | sin | 21 | NA |
| 620 | 73.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 623 | 73.66 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 625 | 73.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 671 | 73.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 674 | 73.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 20 | 20 |
| 708 | 73.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 712 | 73.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 714 | 73.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 721 | 73.96 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 747 | 74.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 748 | 74.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 755 | 74.06 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 4 |
| 762 | 74.08 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 763 | 74.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 764 | 74.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 765 | 74.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 766 | 74.09 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 768 | 74.10 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 773 | 74.11 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 779 | 74.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 782 | 74.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 800 | 74.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 824 | 74.23 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 827 | 74.23 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 834 | 74.25 | humidity | 90.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 919 | 74.41 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 945 | 74.46 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 948 | 74.47 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 981 | 74.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 983 | 74.53 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 984 | 74.53 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 16 |
| 988 | 74.54 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 996 | 74.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 8 |