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Os11g0550300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0217) R2 : 0.696
β1 : -1.54 (0.0811) R2dD : 0.264 R2D : 0.204
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.8 (0.106) R2dE : 0.217 R2E : 0.171
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.662 (0.0479) R2dN8 : 0.186 R2N8 : 0.307
σ : 0.401
deviance : 74.15
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 12.1
memory length : 78
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.21 0.388 10.5 -1.52 0.389 1.5 -0.312 -0.371 0.696 12 9.84 200 -- --
68.3 0.385 10.5 -1.46 0.388 1.49 -0.364 -- 0.711 12 8.751 198 -- --
68.53 0.386 10.5 -1.55 0.385 1.46 -- -0.623 0.691 12.5 13.25 173 -- --
68.83 0.386 10.5 -1.47 0.395 1.45 -- -- 0.715 12.3 11.21 198 -- --
73.65 0.4 10.6 -1.65 -- 1.81 -- -0.797 0.631 -- 14.2 82 -- --
90.4 0.446 10.5 -1.16 0.714 -- 0.0285 -- 0.919 14.3 -- -- -- --
90.41 0.445 10.5 -1.16 0.714 -- -- -- 0.919 14.2 -- -- -- --
74.15 0.401 10.6 -1.54 -- 1.8 -- -- 0.662 -- 12.1 78 -- --
118.97 0.508 10.5 -- 0.517 0.733 -- -- 0.967 12.3 23.08 260 -- --
120.77 0.514 10.5 -1.19 -- -- -- -- 0.902 -- -- -- -- --
125.81 0.525 10.5 -- 0.736 -- -- -- 1.05 14.3 -- -- -- --
128.35 0.529 10.5 -- -- 1.09 -- -- 0.953 -- 24.58 19 -- --
158.07 0.587 10.5 -- -- -- -- -- 1.03 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.66 temperature 30.0 270 < th dose dependent rect. 1 22
2 66.85 temperature 15.0 30 > th dose dependent rect. 23 23
4 67.05 temperature 10.0 270 > th dose dependent rect. 5 23
10 67.38 humidity 60.0 14400 < th dose independent rect. 17 3
23 67.48 temperature 10.0 720 > th dose dependent rect. 23 18
25 67.49 temperature 30.0 270 < th dose dependent rect. 22 23
30 67.64 humidity 60.0 14400 < th dose dependent rect. 17 3
44 67.76 wind 9.0 43200 > th dose dependent rect. 20 3
53 67.92 temperature 20.0 270 > th dose dependent sin 2 NA
57 67.93 temperature 15.0 270 > th dose dependent rect. 3 23
60 67.96 temperature 10.0 720 > th dose dependent rect. 1 17
62 68.03 temperature 15.0 270 > th dose dependent rect. 19 23
103 68.30 wind 7.0 43200 > th dose independent rect. 20 1
110 68.37 temperature 30.0 270 < th dose dependent rect. 3 18
113 68.38 humidity 60.0 14400 > th dose independent rect. 17 3
115 68.40 temperature 10.0 270 > th dose dependent no NA NA
121 68.43 humidity 60.0 14400 > th dose independent rect. 17 7
125 68.46 humidity 60.0 14400 > th dose independent rect. 17 13
133 68.49 humidity 60.0 14400 > th dose independent rect. 17 11
143 68.56 wind 9.0 43200 < th dose independent rect. 20 1
146 68.60 temperature 15.0 270 > th dose dependent rect. 16 23
147 68.60 temperature 30.0 270 < th dose dependent rect. 13 23
151 68.62 temperature 30.0 270 < th dose dependent no NA NA
155 68.64 wind 9.0 43200 > th dose dependent rect. 17 6
163 68.69 wind 9.0 43200 > th dose independent rect. 19 3
182 68.81 radiation 10.0 14400 < th dose independent rect. 17 1
185 68.81 temperature 20.0 30 > th dose dependent rect. 1 21
189 68.82 wind 9.0 43200 > th dose dependent rect. 17 13
218 68.99 radiation 10.0 14400 > th dose dependent rect. 17 13
227 69.04 radiation 10.0 14400 > th dose dependent rect. 17 1
249 69.10 wind 9.0 43200 > th dose dependent rect. 17 4
269 69.19 temperature 10.0 720 > th dose dependent rect. 16 19
273 69.21 wind 9.0 43200 > th dose dependent rect. 17 8
297 69.31 radiation 10.0 14400 < th dose independent rect. 17 7
300 69.32 radiation 10.0 14400 < th dose independent rect. 17 3
301 69.32 radiation 10.0 14400 < th dose independent rect. 17 5
313 69.35 temperature 10.0 720 > th dose dependent rect. 19 16
319 69.37 humidity 80.0 14400 < th dose independent rect. 17 1
323 69.38 radiation 10.0 14400 < th dose independent rect. 17 11
335 69.41 humidity 80.0 14400 > th dose independent rect. 17 3
346 69.44 temperature 10.0 720 > th dose dependent rect. 12 23
348 69.45 temperature 10.0 720 > th dose dependent rect. 14 21
351 69.46 temperature 20.0 30 > th dose dependent rect. 8 14
362 69.49 temperature 30.0 90 < th dose dependent rect. 9 23
396 69.60 temperature 30.0 90 < th dose dependent rect. 4 23
405 69.63 wind 9.0 43200 > th dose dependent rect. 19 11
411 69.66 temperature 30.0 270 < th dose dependent sin 0 NA
422 69.70 temperature 30.0 270 < th dose dependent rect. 7 23
451 69.76 radiation 1.0 14400 > th dose independent rect. 17 12
452 69.76 humidity 80.0 14400 > th dose dependent rect. 21 1
477 69.85 radiation 1.0 14400 > th dose independent rect. 17 2
498 69.89 temperature 20.0 30 > th dose dependent rect. 3 19
506 69.91 wind 9.0 43200 > th dose independent rect. 17 4
510 69.93 wind 9.0 43200 < th dose independent rect. 17 4
518 69.94 temperature 10.0 1440 > th dose dependent rect. 8 11
521 69.95 wind 9.0 43200 > th dose independent rect. 17 13
524 69.95 temperature 15.0 720 > th dose dependent rect. 23 12
531 69.96 humidity 50.0 14400 > th dose independent rect. 16 18
574 70.01 wind 9.0 43200 > th dose independent rect. 19 6
575 70.01 humidity 80.0 14400 > th dose dependent rect. 20 3
586 70.03 wind 9.0 43200 > th dose independent rect. 19 9
610 70.05 precipitation 0.1 43200 < th dose independent rect. 17 1
612 70.05 wind 9.0 43200 > th dose independent rect. 17 8
614 70.05 precipitation 0.1 43200 < th dose dependent rect. 17 1
618 70.05 temperature 30.0 30 < th dose dependent rect. 11 23
643 70.09 temperature 30.0 10 < th dose dependent rect. 5 23
659 70.11 temperature 30.0 1440 < th dose dependent rect. 18 1
662 70.12 precipitation 0.1 43200 > th dose independent rect. 17 1
716 70.19 temperature 15.0 270 > th dose dependent rect. 7 11
723 70.20 temperature 10.0 1440 > th dose dependent rect. 17 2
729 70.21 humidity 50.0 14400 < th dose independent rect. 17 17
730 70.21 temperature 10.0 1440 > th dose dependent rect. 15 4
741 70.23 temperature 10.0 1440 > th dose dependent sin 21 NA
748 70.24 wind 9.0 43200 < th dose independent rect. 19 10
753 70.25 wind 9.0 43200 < th dose independent rect. 17 13
844 70.36 wind 9.0 43200 < th dose independent rect. 19 6
932 70.45 humidity 50.0 14400 < th dose independent rect. 16 19
964 70.48 wind 9.0 43200 < th dose independent rect. 17 8