Os11g0546300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os11g0546300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.24 | 0.333 | 11.8 | 0.478 | 1.26 | -1.01 | 0.0498 | 0.391 | 0.0137 | 10.1 | 19.9 | 1483 | -- | -- |
| 50.53 | 0.331 | 11.8 | 0.411 | 1.26 | -1.03 | 0.0489 | -- | 0.016 | 10.1 | 20.01 | 1476 | -- | -- |
| 50.25 | 0.33 | 11.8 | 0.479 | 1.26 | -1.01 | -- | 0.389 | 0.0142 | 10.1 | 19.9 | 1482 | -- | -- |
| 50.52 | 0.331 | 11.8 | 0.415 | 1.25 | -1.04 | -- | -- | 0.00648 | 10.1 | 20 | 1476 | -- | -- |
| 127.23 | 0.525 | 11.8 | 0.504 | -- | -1.02 | -- | 0.528 | 0.103 | -- | 21.2 | 813 | -- | -- |
| 71.2 | 0.396 | 11.9 | -0.00795 | 1.26 | -- | 0.127 | -- | -0.208 | 10.1 | -- | -- | -- | -- |
| 71.27 | 0.395 | 11.9 | -0.00296 | 1.26 | -- | -- | -- | -0.208 | 10.1 | -- | -- | -- | -- |
| 128.05 | 0.527 | 11.8 | 0.373 | -- | -1.04 | -- | -- | 0.061 | -- | 21.21 | 820 | -- | -- |
| 54.3 | 0.343 | 11.8 | -- | 1.26 | -0.818 | -- | -- | -0.052 | 10 | 20.1 | 1413 | -- | -- |
| 166.93 | 0.604 | 11.9 | -0.02 | -- | -- | -- | -- | -0.21 | -- | -- | -- | -- | -- |
| 71.27 | 0.395 | 11.9 | -- | 1.26 | -- | -- | -- | -0.207 | 10.1 | -- | -- | -- | -- |
| 131.26 | 0.534 | 11.8 | -- | -- | -0.957 | -- | -- | 0.0139 | -- | 21.4 | 808 | -- | -- |
| 166.94 | 0.603 | 11.9 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 2 | 48.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 5 | 49.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 6 | 49.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 14 |
| 10 | 49.22 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 15 | 49.24 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 164 | 49.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 173 | 49.73 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 210 | 49.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 379 | 50.26 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 403 | 50.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 410 | 50.38 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 427 | 50.46 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 21 |
| 434 | 50.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 436 | 50.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 466 | 50.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 551 | 50.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 571 | 51.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 600 | 51.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 648 | 51.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 667 | 51.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 678 | 51.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 693 | 51.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 747 | 51.76 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |