Os11g0546200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0546200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.35 | 0.48 | 6.26 | -0.21 | 0.171 | -1.55 | -0.197 | -0.664 | -0.135 | 18.8 | 22.94 | 7 | -- | -- |
| 105 | 0.477 | 6.27 | -0.275 | 0.172 | -1.48 | -0.182 | -- | -0.143 | 18.6 | 22.8 | 6 | -- | -- |
| 104.41 | 0.476 | 6.26 | -0.2 | 0.168 | -1.57 | -- | -0.696 | -0.131 | 18.6 | 22.8 | 12 | -- | -- |
| 105.08 | 0.477 | 6.27 | -0.271 | 0.171 | -1.47 | -- | -- | -0.144 | 18.4 | 22.8 | 5 | -- | -- |
| 105.82 | 0.479 | 6.26 | -0.21 | -- | -1.6 | -- | -0.74 | -0.133 | -- | 22.75 | 21 | -- | -- |
| 130.7 | 0.536 | 6.23 | 0.0159 | 0.287 | -- | 0.143 | -- | 0.0399 | 15.2 | -- | -- | -- | -- |
| 130.76 | 0.535 | 6.23 | 0.0188 | 0.288 | -- | -- | -- | 0.0408 | 15.3 | -- | -- | -- | -- |
| 106.6 | 0.481 | 6.27 | -0.277 | -- | -1.48 | -- | -- | -0.147 | -- | 22.8 | 5 | -- | -- |
| 106.86 | 0.481 | 6.26 | -- | 0.177 | -1.38 | -- | -- | -0.105 | 18.1 | 22.76 | 5 | -- | -- |
| 135.47 | 0.544 | 6.23 | 0.0066 | -- | -- | -- | -- | 0.0332 | -- | -- | -- | -- | -- |
| 130.77 | 0.535 | 6.23 | -- | 0.288 | -- | -- | -- | 0.0387 | 15.3 | -- | -- | -- | -- |
| 108.47 | 0.485 | 6.26 | -- | -- | -1.39 | -- | -- | -0.104 | -- | 22.7 | 5 | -- | -- |
| 135.47 | 0.543 | 6.23 | -- | -- | -- | -- | -- | 0.0325 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.39 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 101.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 6 | 102.81 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 8 | 103.10 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 10 | 103.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 15 | 104.06 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 17 | 104.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 21 | 104.17 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 22 | 104.18 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 28 | 104.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 37 | 104.98 | temperature | 20.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 43 | 105.18 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 49 | 105.36 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 55 | 105.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 63 | 105.58 | temperature | 20.0 | 30 | < th | dose independent | sin | 7 | NA |
| 65 | 105.59 | wind | 9.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 73 | 105.65 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 82 | 105.76 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 95 | 105.98 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 97 | 106.00 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 104 | 106.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 110 | 106.20 | temperature | 20.0 | 270 | < th | dose independent | sin | 10 | NA |
| 123 | 106.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 142 | 106.50 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 143 | 106.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 147 | 106.52 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 149 | 106.53 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 157 | 106.58 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 159 | 106.60 | wind | 9.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 192 | 106.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 193 | 106.84 | temperature | 20.0 | 270 | < th | dose independent | rect. | 22 | 6 |
| 204 | 106.92 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 209 | 106.94 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 214 | 106.96 | temperature | 20.0 | 30 | < th | dose independent | rect. | 19 | 19 |
| 229 | 107.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 243 | 107.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 245 | 107.08 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 246 | 107.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 258 | 107.14 | temperature | 20.0 | 30 | < th | dose independent | rect. | 19 | 17 |
| 292 | 107.24 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 297 | 107.26 | temperature | 20.0 | 270 | > th | dose independent | sin | 11 | NA |
| 304 | 107.27 | temperature | 20.0 | 10 | > th | dose independent | sin | 7 | NA |
| 306 | 107.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 308 | 107.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 311 | 107.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 319 | 107.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 330 | 107.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 332 | 107.36 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 356 | 107.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 365 | 107.50 | temperature | 20.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 377 | 107.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 385 | 107.59 | temperature | 20.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 390 | 107.60 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 398 | 107.63 | temperature | 20.0 | 30 | < th | dose independent | rect. | 16 | 22 |
| 413 | 107.66 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 414 | 107.67 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 421 | 107.68 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 424 | 107.68 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 428 | 107.69 | temperature | 20.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 446 | 107.76 | temperature | 20.0 | 30 | < th | dose independent | rect. | 11 | 23 |
| 450 | 107.77 | temperature | 20.0 | 30 | < th | dose independent | no | NA | NA |
| 459 | 107.78 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 461 | 107.79 | temperature | 20.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 462 | 107.79 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 465 | 107.80 | temperature | 20.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 466 | 107.80 | temperature | 20.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 467 | 107.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 473 | 107.83 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 487 | 107.85 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 501 | 107.87 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 507 | 107.89 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 541 | 107.98 | temperature | 20.0 | 270 | < th | dose independent | rect. | 10 | 23 |
| 613 | 108.13 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 620 | 108.15 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 21 | 12 |
| 640 | 108.22 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 721 | 108.40 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 773 | 108.51 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 776 | 108.52 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 815 | 108.59 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 862 | 108.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 884 | 108.71 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 892 | 108.73 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 964 | 108.87 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 23 |