Os11g0544600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0544600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.59 | 0.268 | 11 | 0.614 | 0.705 | 0.359 | 0.506 | -0.322 | 0.395 | 20 | 20.52 | 106 | -- | -- |
| 32.28 | 0.267 | 11 | 0.673 | 0.732 | 0.36 | 0.655 | -- | 0.385 | 20.3 | 21.6 | 56 | -- | -- |
| 33.31 | 0.269 | 11 | 0.603 | 0.706 | 0.353 | -- | -0.34 | 0.399 | 19.9 | 20.6 | 106 | -- | -- |
| 33.37 | 0.269 | 11 | 0.664 | 0.728 | 0.355 | -- | -- | 0.392 | 20 | 21.6 | 44 | -- | -- |
| 59.28 | 0.359 | 11 | 0.552 | -- | 0.392 | -- | -0.0621 | 0.388 | -- | 20.71 | 344 | -- | -- |
| 38.97 | 0.293 | 11 | 0.772 | 0.701 | -- | 0.467 | -- | 0.481 | 19.6 | -- | -- | -- | -- |
| 39.51 | 0.294 | 11 | 0.762 | 0.705 | -- | -- | -- | 0.482 | 19.4 | -- | -- | -- | -- |
| 49.59 | 0.328 | 11 | 0.679 | -- | 0.562 | -- | -- | 0.285 | -- | 25.2 | 533 | -- | -- |
| 44.16 | 0.31 | 11 | -- | 0.727 | 0.453 | -- | -- | 0.302 | 20.3 | 21.7 | 51 | -- | -- |
| 65.98 | 0.38 | 11 | 0.751 | -- | -- | -- | -- | 0.471 | -- | -- | -- | -- | -- |
| 54.82 | 0.346 | 11 | -- | 0.698 | -- | -- | -- | 0.397 | 19.5 | -- | -- | -- | -- |
| 58.11 | 0.355 | 11 | -- | -- | 0.65 | -- | -- | 0.161 | -- | 25.25 | 570 | -- | -- |
| 80.86 | 0.42 | 11 | -- | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 30 | 29.68 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 15 |
| 45 | 29.97 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 70 | 30.29 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 71 | 30.31 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 19 |
| 121 | 30.70 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 184 | 31.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 192 | 31.21 | temperature | 30 | 270 | < th | dose dependent | sin | 12 | NA |
| 236 | 31.38 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 10 |
| 296 | 31.57 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 9 |
| 297 | 31.57 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 15 |
| 310 | 31.61 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 313 | 31.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 317 | 31.62 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 358 | 31.73 | temperature | 25 | 270 | < th | dose independent | sin | 12 | NA |
| 365 | 31.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 376 | 31.77 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 11 |
| 405 | 31.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 410 | 31.83 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 448 | 31.92 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 461 | 31.95 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 479 | 31.98 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 5 |
| 494 | 32.01 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 537 | 32.09 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 2 |
| 571 | 32.13 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 7 |
| 582 | 32.15 | temperature | 10 | 270 | > th | dose dependent | sin | 12 | NA |
| 601 | 32.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 673 | 32.29 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 20 | 5 |
| 687 | 32.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 791 | 32.49 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 14 |
| 844 | 32.58 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 21 | 2 |
| 850 | 32.59 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 2 |
| 855 | 32.60 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 4 |
| 878 | 32.62 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 916 | 32.67 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 14 |
| 978 | 32.75 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |