Os11g0544000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0544000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 190.7 | 0.649 | 9.56 | -1.37 | 1.48 | -4.47 | 0.213 | 2.57 | -0.805 | 20.8 | 7.371 | 237 | 3.4 | 7.07 |
| 193.39 | 0.648 | 9.56 | -1.44 | 1.7 | -4.26 | -1.2 | -- | -0.81 | 20.4 | 7.013 | 228 | 3.65 | 6.8 |
| 190.54 | 0.643 | 9.57 | -1.36 | 1.51 | -4.44 | -- | 2.48 | -0.814 | 20.7 | 7.171 | 236 | 3.44 | 7.03 |
| 199.57 | 0.658 | 9.58 | -1.5 | 1.7 | -4.23 | -- | -- | -0.835 | 20.5 | 6.141 | 226 | 3.68 | 6.85 |
| 202.79 | 0.663 | 9.55 | -1.29 | -- | -5.55 | -- | 1.67 | -0.834 | -- | -2.378 | 270 | 2.88 | 7.5 |
| 377.39 | 0.911 | 9.72 | -1.69 | 4.76 | -- | -1.13 | -- | -1.07 | 21 | -- | -- | -- | -- |
| 381.73 | 0.915 | 9.72 | -1.65 | 4.76 | -- | -- | -- | -1.07 | 21 | -- | -- | -- | -- |
| 208.98 | 0.673 | 9.55 | -1.47 | -- | -5.47 | -- | -- | -0.886 | -- | -2.924 | 267 | 2.87 | 7.58 |
| 257.73 | 0.748 | 9.54 | -- | 1.75 | -4.16 | -- | -- | -0.682 | 20.5 | 6.828 | 214 | 3.67 | 6.95 |
| 1681.78 | 1.92 | 9.59 | -1.64 | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
| 453.51 | 0.996 | 9.68 | -- | 4.76 | -- | -- | -- | -0.885 | 21 | -- | -- | -- | -- |
| 265.57 | 0.759 | 9.49 | -- | -- | -5.65 | -- | -- | -0.669 | -- | 2.025 | 263 | 2.92 | 7.54 |
| 1753.11 | 1.95 | 9.55 | -- | -- | -- | -- | -- | -0.917 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 196.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 2 | 199.04 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 5 |
| 7 | 205.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 13 | 213.08 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 17 | 217.02 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 21 | 218.39 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 6 |
| 23 | 218.90 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 25 | 219.50 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 26 | 219.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 34 | 223.77 | radiation | 1.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 46 | 226.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 6 |
| 47 | 226.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 16 |
| 48 | 226.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 57 | 227.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 58 | 227.75 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 59 | 227.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 16 |
| 60 | 227.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 61 | 228.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 62 | 228.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 63 | 228.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 8 |
| 64 | 228.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 70 | 228.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 76 | 228.90 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 82 | 229.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 83 | 229.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 84 | 229.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 87 | 229.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 8 |
| 88 | 229.31 | radiation | 20.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 92 | 229.36 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 95 | 229.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 8 |
| 96 | 229.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 98 | 229.57 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 111 | 231.05 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 16 |
| 122 | 232.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 16 |
| 123 | 232.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 124 | 232.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 8 |
| 125 | 232.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 16 |
| 127 | 232.55 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 128 | 232.81 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 179 | 233.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 8 |
| 180 | 233.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 8 |
| 182 | 233.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 210 | 234.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 16 |
| 224 | 235.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 227 | 235.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 228 | 235.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 16 |
| 229 | 235.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 8 |
| 231 | 236.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 16 |
| 232 | 236.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 240 | 236.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 243 | 236.95 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 9 |
| 246 | 237.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 254 | 237.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 255 | 237.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 260 | 238.01 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 6 |
| 263 | 238.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 271 | 238.75 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 6 |
| 275 | 239.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 279 | 239.53 | radiation | 1.0 | 270 | < th | dose independent | sin | 10 | NA |
| 280 | 239.79 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 282 | 239.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 16 |
| 283 | 239.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 290 | 240.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 17 |
| 291 | 240.64 | radiation | 1.0 | 270 | > th | dose independent | sin | 10 | NA |
| 292 | 240.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 16 |
| 293 | 240.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 302 | 241.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 303 | 241.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 304 | 241.37 | radiation | 30.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 328 | 242.17 | radiation | 1.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 337 | 242.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 8 |
| 354 | 243.57 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 357 | 243.69 | humidity | 90.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 377 | 244.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 387 | 244.32 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 392 | 244.72 | radiation | 1.0 | 90 | < th | dose independent | sin | 7 | NA |
| 393 | 244.86 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 399 | 245.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 401 | 245.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 422 | 245.62 | radiation | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 461 | 247.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 476 | 247.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 481 | 247.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 8 |
| 482 | 247.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 496 | 248.42 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 528 | 249.38 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 540 | 249.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 17 |
| 546 | 250.04 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 8 |
| 552 | 250.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 566 | 250.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 567 | 250.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 568 | 250.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 571 | 250.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 572 | 250.92 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 578 | 250.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 584 | 251.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 4 |
| 585 | 251.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 589 | 251.19 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 4 |
| 596 | 251.45 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 619 | 252.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 626 | 252.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 628 | 252.35 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 4 |
| 631 | 252.43 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 6 |
| 678 | 252.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 736 | 254.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 816 | 256.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 932 | 258.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 959 | 259.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 18 |
| 960 | 259.31 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 969 | 259.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 16 |
| 973 | 259.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 999 | 260.49 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 7 |