Os11g0543100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0543100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.4 | 0.473 | 11.1 | 2.11 | 0.481 | -1.38 | 1.34 | -0.481 | 0.777 | 2.19 | 0.1672 | 1503 | -- | -- |
| 101.32 | 0.469 | 11.1 | 2.06 | 0.473 | -1.26 | 1.3 | -- | 0.774 | 2.3 | 0.06 | 1506 | -- | -- |
| 104.16 | 0.475 | 11.1 | 1.91 | 0.639 | -0.818 | -- | 2.5 | 0.759 | 2.78 | 0.1878 | 1655 | -- | -- |
| 107.21 | 0.482 | 11.1 | 2.03 | 0.456 | -1.25 | -- | -- | 0.778 | 2.84 | 0.05986 | 1495 | -- | -- |
| 113.13 | 0.495 | 11.1 | 1.96 | -- | 0.223 | -- | 4.24 | 0.753 | -- | 0.7402 | 1629 | -- | -- |
| 116.79 | 0.507 | 11.1 | 2.4 | 0.326 | -- | 1.38 | -- | 0.911 | 2.52 | -- | -- | -- | -- |
| 122.75 | 0.519 | 11.1 | 2.36 | 0.363 | -- | -- | -- | 0.901 | 3.85 | -- | -- | -- | -- |
| 117.67 | 0.505 | 11.1 | 2.06 | -- | -1.05 | -- | -- | 0.778 | -- | 0.05999 | 2834 | -- | -- |
| 153.08 | 0.576 | 11.1 | -- | 0.352 | -1.59 | -- | -- | 0.48 | 3.2 | 0.0001126 | 47520 | -- | -- |
| 130 | 0.533 | 11.1 | 2.38 | -- | -- | -- | -- | 0.911 | -- | -- | -- | -- | -- |
| 270.03 | 0.769 | 11.1 | -- | 0.409 | -- | -- | -- | 0.638 | 3.78 | -- | -- | -- | -- |
| 145.47 | 0.562 | 11.2 | -- | -- | -1.75 | -- | -- | 0.289 | -- | 0.0007132 | 47444 | -- | -- |
| 279.28 | 0.78 | 11.1 | -- | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.54 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 2 | 97.31 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 3 | 97.35 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 4 | 97.35 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 8 | 97.56 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 3 |
| 9 | 97.58 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 11 | 97.61 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 16 |
| 12 | 97.71 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 10 |
| 15 | 97.74 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 3 |
| 17 | 97.76 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 5 |
| 20 | 97.84 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 14 |
| 24 | 97.94 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 5 |
| 31 | 98.11 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 11 |
| 35 | 98.20 | radiation | 1 | 720 | < th | dose dependent | sin | 20 | NA |
| 49 | 98.40 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 11 |
| 70 | 98.64 | temperature | 25 | 720 | < th | dose independent | sin | 20 | NA |
| 76 | 98.73 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 85 | 98.82 | radiation | 1 | 720 | < th | dose independent | sin | 20 | NA |
| 89 | 98.85 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 3 |
| 102 | 98.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 103 | 98.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 121 | 99.10 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 142 | 99.26 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 148 | 99.30 | wind | 7 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 150 | 99.31 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 185 | 99.50 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 190 | 99.54 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 198 | 99.59 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 199 | 99.59 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 205 | 99.63 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 217 | 99.73 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 227 | 99.78 | wind | 9 | 14400 | > th | dose independent | rect. | 22 | 18 |
| 231 | 99.79 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 247 | 99.86 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 254 | 99.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 275 | 99.96 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 276 | 99.97 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 293 | 100.03 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 299 | 100.05 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 322 | 100.13 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 327 | 100.14 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 378 | 100.32 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 433 | 100.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 14 |
| 441 | 100.52 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 12 |
| 479 | 100.62 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 481 | 100.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 535 | 100.74 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 614 | 100.89 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 618 | 100.89 | wind | 7 | 14400 | > th | dose dependent | sin | 1 | NA |
| 634 | 100.92 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 685 | 101.07 | wind | 9 | 14400 | > th | dose independent | sin | 5 | NA |
| 723 | 101.15 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 727 | 101.16 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 5 |
| 738 | 101.18 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 7 |
| 763 | 101.23 | wind | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 932 | 101.49 | radiation | 10 | 14400 | > th | dose independent | rect. | 17 | 14 |