Os11g0539000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0539000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.76 | 0.787 | 3.97 | -0.797 | 0.972 | 1.38 | -0.808 | -2.33 | 0.905 | 1.31 | 78.41 | 88 | 3.05 | 5.39 |
| 295.93 | 0.801 | 3.95 | -0.643 | 0.99 | 1.37 | -1.03 | -- | 0.933 | 1.41 | 78 | 86 | 3.13 | 5.63 |
| 282.35 | 0.783 | 3.97 | -0.777 | 0.982 | 1.4 | -- | -2.57 | 0.907 | 1.11 | 78.53 | 86 | 3.02 | 5.74 |
| 301.73 | 0.809 | 3.96 | -0.601 | 0.974 | 1.4 | -- | -- | 0.942 | 1.12 | 78.14 | 92 | 3.05 | 5.61 |
| 335.49 | 0.853 | 3.95 | -0.738 | -- | 1.55 | -- | -2.36 | 0.951 | -- | 78.75 | 66 | 3.02 | 5.74 |
| 350.44 | 0.878 | 3.92 | -0.587 | 1.73 | -- | -2.06 | -- | 1.04 | 3.89 | -- | -- | -- | -- |
| 362.69 | 0.892 | 3.91 | -0.56 | 1.71 | -- | -- | -- | 1.05 | 3.79 | -- | -- | -- | -- |
| 354.46 | 0.877 | 3.94 | -0.582 | -- | 1.54 | -- | -- | 0.973 | -- | 78.78 | 73 | 3.02 | 5.75 |
| 311.2 | 0.822 | 3.94 | -- | 0.968 | 1.4 | -- | -- | 1.01 | 1.06 | 78.36 | 95 | 3.03 | 5.68 |
| 524.06 | 1.07 | 3.91 | -0.489 | -- | -- | -- | -- | 1.09 | -- | -- | -- | -- | -- |
| 370.95 | 0.901 | 3.9 | -- | 1.7 | -- | -- | -- | 1.11 | 3.8 | -- | -- | -- | -- |
| 363.38 | 0.888 | 3.93 | -- | -- | 1.53 | -- | -- | 1.04 | -- | 78.75 | 73 | 3.03 | 5.74 |
| 530.37 | 1.07 | 3.9 | -- | -- | -- | -- | -- | 1.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 286.25 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 2 | 286.66 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 6 | 288.67 | radiation | 30.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 19 | 293.09 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 24 | 293.72 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 28 | 294.17 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 29 | 294.30 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 6 |
| 30 | 294.64 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 37 | 295.36 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 39 | 295.60 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 44 | 296.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 46 | 296.55 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 47 | 296.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 49 | 296.55 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 50 | 296.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 52 | 296.55 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 53 | 296.55 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 54 | 296.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 59 | 296.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 18 |
| 60 | 296.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 18 |
| 63 | 297.18 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 6 |
| 64 | 297.18 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 72 | 297.36 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 92 | 297.75 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 95 | 297.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 96 | 297.93 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 97 | 297.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 100 | 297.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 101 | 297.96 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 102 | 297.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 18 |
| 111 | 298.14 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 6 |
| 113 | 298.19 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 116 | 298.37 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 120 | 298.66 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 122 | 298.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 123 | 298.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 124 | 298.79 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 129 | 298.95 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 147 | 299.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 148 | 299.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 150 | 299.47 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 151 | 299.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 154 | 299.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 155 | 299.47 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 160 | 299.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 162 | 299.55 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 164 | 299.68 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 199 | 300.71 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 205 | 300.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 206 | 300.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 237 | 301.80 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 242 | 302.00 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 248 | 302.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 249 | 302.14 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 262 | 302.45 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 267 | 302.57 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 279 | 302.72 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 283 | 302.80 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 13 |
| 295 | 303.13 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 297 | 303.18 | humidity | 90.0 | 270 | < th | dose independent | sin | 8 | NA |
| 304 | 303.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 13 |
| 352 | 304.03 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 368 | 304.17 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 379 | 304.31 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 409 | 304.45 | wind | 9.0 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 412 | 304.55 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 434 | 304.81 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 453 | 304.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 454 | 305.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 470 | 305.19 | wind | 7.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 480 | 305.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 497 | 305.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 22 | 5 |
| 499 | 305.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 501 | 305.51 | temperature | 10.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 502 | 305.51 | temperature | 30.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 503 | 305.51 | humidity | 50.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 506 | 305.51 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 22 | 5 |
| 507 | 305.51 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 514 | 305.51 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 515 | 305.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 516 | 305.51 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 563 | 305.76 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 572 | 305.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 573 | 305.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 575 | 305.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 576 | 305.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 578 | 305.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 579 | 305.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 594 | 306.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 597 | 306.13 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 615 | 306.25 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 10 |
| 628 | 306.39 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 19 |
| 630 | 306.39 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 632 | 306.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 641 | 306.50 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 7 |
| 662 | 306.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 669 | 306.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 670 | 306.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 671 | 306.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 743 | 307.25 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 771 | 307.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 772 | 307.40 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 10 |
| 792 | 307.49 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 810 | 307.62 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 834 | 307.82 | wind | 9.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 843 | 307.87 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 854 | 308.00 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 878 | 308.24 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 894 | 308.35 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 7 |
| 899 | 308.37 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 961 | 308.64 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 980 | 308.88 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 18 |