Os11g0538400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0538400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.06 | 0.329 | 3.08 | 0.00142 | 0.0207 | 0.457 | -0.239 | -1.04 | 0.00959 | 2.05 | 0.2979 | 1615 | -- | -- |
| 49.63 | 0.328 | 3.07 | 0.022 | 0.0176 | 0.414 | -0.257 | -- | 0.00727 | 1.99 | 0.3375 | 1667 | -- | -- |
| 49.26 | 0.327 | 3.08 | 0.0103 | 0.0198 | 0.45 | -- | -1.02 | 0.0122 | 1.3 | 0.2688 | 1624 | -- | -- |
| 49.82 | 0.329 | 3.07 | 0.0356 | 0.0358 | 0.412 | -- | -- | 0.0146 | 22.6 | 0.3841 | 1667 | -- | -- |
| 49.3 | 0.327 | 3.08 | 0.00817 | -- | 0.455 | -- | -1.02 | 0.0108 | -- | 0.2573 | 1624 | -- | -- |
| 51.16 | 0.335 | 3.08 | 0.0907 | 0.0265 | -- | -0.236 | -- | -0.0325 | 2.9 | -- | -- | -- | -- |
| 51.35 | 0.336 | 3.08 | 0.0961 | 0.0259 | -- | -- | -- | -0.031 | 1.87 | -- | -- | -- | -- |
| 49.88 | 0.329 | 3.07 | 0.0242 | -- | 0.422 | -- | -- | 0.00868 | -- | 0.3 | 1667 | -- | -- |
| 49.8 | 0.329 | 3.07 | -- | 0.0361 | 0.413 | -- | -- | 0.0149 | 22.1 | 0.3961 | 2462 | -- | -- |
| 51.39 | 0.335 | 3.08 | 0.0972 | -- | -- | -- | -- | -0.0304 | -- | -- | -- | -- | -- |
| 51.59 | 0.336 | 3.08 | -- | 0.0277 | -- | -- | -- | -0.0417 | 1.96 | -- | -- | -- | -- |
| 49.87 | 0.329 | 3.07 | -- | -- | 0.409 | -- | -- | 0.015 | -- | 0.3998 | 2498 | -- | -- |
| 51.64 | 0.335 | 3.08 | -- | -- | -- | -- | -- | -0.0412 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.06 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 24 | 47.28 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 71 | 47.77 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 2 |
| 89 | 48.13 | temperature | 30.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 104 | 48.15 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 126 | 48.69 | wind | 1.0 | 1440 | < th | dose independent | rect. | 24 | 2 |
| 145 | 48.81 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 6 |
| 179 | 49.05 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 182 | 49.08 | wind | 1.0 | 1440 | > th | dose independent | rect. | 24 | 2 |
| 190 | 49.12 | wind | 1.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 211 | 49.23 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 221 | 49.28 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 222 | 49.29 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 232 | 49.31 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 241 | 49.36 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 248 | 49.39 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 249 | 49.40 | wind | 1.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 253 | 49.41 | wind | 1.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 283 | 49.50 | wind | 7.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 362 | 49.64 | wind | 7.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 441 | 49.75 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 16 |
| 461 | 49.80 | wind | 1.0 | 1440 | < th | dose independent | rect. | 24 | 6 |
| 483 | 49.84 | wind | 3.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 555 | 49.89 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 573 | 49.92 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 577 | 49.92 | humidity | 90.0 | 90 | < th | dose independent | rect. | 18 | 16 |
| 604 | 49.93 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 610 | 49.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 22 |
| 611 | 49.94 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 617 | 49.94 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 21 |
| 618 | 49.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 621 | 49.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 625 | 49.95 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 631 | 49.95 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 632 | 49.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 654 | 49.95 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 657 | 49.95 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 659 | 49.95 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 686 | 49.96 | wind | 1.0 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 687 | 49.96 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 699 | 49.97 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 730 | 49.98 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 21 |
| 745 | 49.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 747 | 49.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 748 | 49.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 752 | 49.99 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 754 | 49.99 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 759 | 49.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 763 | 49.99 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 17 |
| 765 | 49.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 766 | 49.99 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 767 | 49.99 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 772 | 49.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 786 | 50.01 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 795 | 50.02 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 801 | 50.02 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 816 | 50.03 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 856 | 50.05 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 885 | 50.06 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 916 | 50.08 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 925 | 50.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 945 | 50.10 | wind | 1.0 | 1440 | < th | dose dependent | no | NA | NA |