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Os11g0536000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0268) R2 : 0.685
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.13 (0.0683) R2dC : 0.678 R2C : 0.667
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.254 (0.0564) R2dN8 : 0.0181 R2N8 : 0.00683
σ : 0.505
deviance : 116.78
__
_____
C
peak time of C : 8.09
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
92.76 0.453 10.3 0.78 2.05 0.897 -0.795 0.64 -0.0166 8.46 26.44 211 -- --
93.27 0.45 10.2 0.897 2.05 0.886 -0.796 -- 0.0183 8.49 27.08 203 -- --
94.76 0.453 10.3 0.752 2.06 0.897 -- 0.683 -0.0179 8.44 26.26 204 -- --
95.3 0.455 10.2 0.868 2.04 0.866 -- -- 0.00897 8.48 27 205 -- --
269.76 0.765 10.2 1.52 -- 2.38 -- -1.55 0.235 -- 35.43 583 -- --
104.14 0.478 10.3 0.663 2.13 -- -0.778 -- -0.183 8.12 -- -- -- --
105.97 0.482 10.3 0.64 2.13 -- -- -- -0.182 8.11 -- -- -- --
270.29 0.766 10.3 1.21 -- 2.34 -- -- 0.188 -- 38.36 600 -- --
112.82 0.495 10.3 -- 2.09 0.492 -- -- -0.157 8.26 26.4 194 -- --
354.54 0.88 10.3 0.659 -- -- -- -- -0.157 -- -- -- -- --
116.78 0.505 10.3 -- 2.13 -- -- -- -0.254 8.09 -- -- -- --
305.3 0.814 10.3 -- -- 1.9 -- -- -0.000295 -- 45.67 579 -- --
365.98 0.893 10.4 -- -- -- -- -- -0.23 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.14 temperature 20.0 90 > th dose independent rect. 7 22
4 89.77 wind 9.0 14400 < th dose independent rect. 6 6
9 90.11 wind 9.0 43200 > th dose independent rect. 10 4
10 90.19 wind 9.0 43200 > th dose independent rect. 9 6
12 90.21 wind 9.0 14400 > th dose independent rect. 7 5
15 90.25 wind 9.0 43200 < th dose independent rect. 10 4
20 90.44 wind 9.0 43200 < th dose independent rect. 9 6
28 90.65 wind 7.0 43200 > th dose dependent rect. 10 4
29 90.68 temperature 30.0 270 < th dose dependent rect. 10 21
34 90.81 wind 9.0 14400 > th dose dependent rect. 10 2
35 90.82 wind 3.0 43200 < th dose independent rect. 11 1
37 90.88 wind 3.0 43200 > th dose independent rect. 11 1
40 90.93 wind 9.0 14400 > th dose dependent rect. 6 7
42 90.94 temperature 10.0 90 > th dose dependent rect. 7 22
51 91.01 temperature 10.0 720 > th dose dependent rect. 16 3
55 91.04 temperature 10.0 270 > th dose dependent rect. 21 13
60 91.06 temperature 30.0 270 < th dose dependent rect. 17 13
71 91.23 temperature 30.0 90 < th dose dependent rect. 19 12
76 91.28 temperature 10.0 270 > th dose dependent rect. 16 11
81 91.32 wind 1.0 4320 < th dose dependent rect. 7 1
103 91.51 wind 1.0 43200 < th dose dependent rect. 5 3
107 91.56 temperature 20.0 90 > th dose independent rect. 16 12
113 91.67 wind 1.0 43200 < th dose dependent rect. 4 8
130 91.76 wind 9.0 43200 < th dose dependent rect. 11 2
138 91.78 wind 1.0 43200 > th dose dependent rect. 11 2
170 91.97 wind 5.0 43200 < th dose dependent rect. 11 2
172 91.98 wind 1.0 43200 > th dose independent rect. 5 3
178 92.00 wind 9.0 43200 > th dose independent sin 23 NA
188 92.03 wind 9.0 43200 < th dose independent rect. 24 17
196 92.06 radiation 40.0 4320 < th dose independent rect. 17 16
198 92.07 wind 1.0 4320 < th dose independent rect. 7 1
202 92.08 radiation 40.0 43200 > th dose dependent rect. 11 1
207 92.09 radiation 40.0 4320 < th dose independent rect. 19 14
210 92.10 radiation 40.0 4320 < th dose independent rect. 1 8
230 92.15 wind 9.0 43200 < th dose independent sin 23 NA
231 92.15 wind 1.0 4320 > th dose independent rect. 7 1
233 92.15 radiation 40.0 4320 < th dose independent rect. 3 6
235 92.15 wind 1.0 43200 < th dose dependent rect. 6 1
240 92.16 precipitation 0.1 43200 > th dose dependent rect. 18 2
242 92.17 wind 1.0 43200 > th dose independent rect. 20 12
249 92.20 humidity 70.0 720 > th dose independent rect. 19 12
258 92.24 radiation 40.0 4320 < th dose independent rect. 7 2
272 92.28 wind 3.0 43200 < th dose dependent rect. 20 10
286 92.31 wind 1.0 43200 > th dose independent rect. 18 14
289 92.32 radiation 30.0 43200 < th dose independent rect. 11 1
293 92.33 radiation 40.0 43200 > th dose independent rect. 11 1
309 92.36 radiation 20.0 43200 < th dose independent rect. 16 15
311 92.36 humidity 80.0 14400 < th dose dependent rect. 6 1
339 92.40 radiation 40.0 43200 < th dose independent rect. 15 21
345 92.42 wind 9.0 720 < th dose independent rect. 19 12
346 92.42 wind 1.0 43200 < th dose independent rect. 20 12
354 92.44 radiation 40.0 43200 < th dose independent rect. 6 6
355 92.44 radiation 40.0 43200 < th dose independent rect. 4 8
357 92.44 radiation 40.0 43200 < th dose independent rect. 2 10
406 92.51 radiation 40.0 43200 < th dose independent sin 10 NA
413 92.51 temperature 15.0 90 > th dose dependent rect. 18 10
429 92.54 wind 1.0 43200 < th dose independent rect. 18 14
454 92.59 wind 9.0 43200 > th dose independent rect. 9 16
473 92.60 temperature 10.0 720 > th dose independent rect. 7 12
474 92.60 temperature 10.0 720 > th dose independent rect. 19 12
475 92.60 temperature 30.0 720 < th dose independent rect. 19 12
476 92.60 humidity 50.0 720 > th dose independent rect. 19 12
477 92.60 atmosphere 995.0 720 > th dose independent rect. 19 12
478 92.60 atmosphere 1015.0 720 < th dose independent rect. 7 12
479 92.60 radiation 40.0 720 < th dose independent rect. 19 12
491 92.61 temperature 30.0 270 < th dose dependent sin 11 NA
500 92.63 humidity 80.0 14400 < th dose independent rect. 6 1
514 92.65 wind 9.0 43200 > th dose independent rect. 10 21
538 92.68 radiation 40.0 43200 > th dose dependent sin 10 NA
549 92.70 atmosphere 995.0 720 > th dose independent rect. 19 20
554 92.71 radiation 20.0 43200 < th dose independent rect. 16 2
556 92.71 radiation 20.0 43200 < th dose independent rect. 16 7
558 92.71 radiation 20.0 43200 < th dose independent rect. 16 11
597 92.73 humidity 80.0 14400 > th dose independent rect. 6 1
606 92.73 radiation 30.0 4320 > th dose dependent rect. 16 17
647 92.79 wind 9.0 43200 > th dose independent rect. 19 22
653 92.79 wind 3.0 43200 < th dose dependent rect. 21 7
701 92.82 radiation 30.0 4320 > th dose dependent rect. 7 2
740 92.83 wind 9.0 43200 < th dose independent rect. 9 16
777 92.86 wind 9.0 43200 < th dose independent rect. 19 22
814 92.88 wind 9.0 43200 < th dose independent rect. 10 22
900 92.93 humidity 70.0 720 > th dose independent rect. 19 4
933 92.94 radiation 10.0 43200 > th dose dependent rect. 17 13
934 92.95 wind 7.0 43200 < th dose independent rect. 24 1
980 92.96 radiation 40.0 720 < th dose independent rect. 14 5