Os11g0531700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NUDIX hydrolase domain containing protein.
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Os11g0531700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NUDIX hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.41 | 0.437 | 10.3 | -1.34 | 0.774 | -1.16 | -1.31 | -0.443 | -0.304 | 7.92 | 22.57 | 1091 | -- | -- |
| 86.54 | 0.433 | 10.3 | -1.24 | 0.781 | -1.2 | -1.24 | -- | -0.26 | 7.86 | 22.24 | 1101 | -- | -- |
| 90.94 | 0.444 | 10.3 | -1.31 | 0.842 | -1.12 | -- | -0.161 | -0.277 | 8.23 | 22.3 | 1183 | -- | -- |
| 90.95 | 0.444 | 10.3 | -1.26 | 0.841 | -1.13 | -- | -- | -0.264 | 8.21 | 22.3 | 1181 | -- | -- |
| 104.34 | 0.476 | 10.3 | -0.956 | -- | -1.72 | -- | 1.45 | -0.14 | -- | 22.29 | 782 | -- | -- |
| 129.11 | 0.533 | 10.3 | -1.6 | 0.929 | -- | -0.886 | -- | -0.497 | 8.83 | -- | -- | -- | -- |
| 131.6 | 0.537 | 10.3 | -1.63 | 0.928 | -- | -- | -- | -0.496 | 9.05 | -- | -- | -- | -- |
| 105.9 | 0.479 | 10.3 | -1.21 | -- | -1.64 | -- | -- | -0.229 | -- | 22.49 | 774 | -- | -- |
| 111.16 | 0.491 | 10.2 | -- | 0.916 | -1.5 | -- | -- | 0.131 | 8.82 | 17.82 | 24317 | -- | -- |
| 181.17 | 0.629 | 10.4 | -1.63 | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
| 201.38 | 0.664 | 10.3 | -- | 0.927 | -- | -- | -- | -0.315 | 9.18 | -- | -- | -- | -- |
| 140.95 | 0.553 | 10.3 | -- | -- | -1.95 | -- | -- | -0.0164 | -- | 20.98 | 788 | -- | -- |
| 251.16 | 0.74 | 10.3 | -- | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 11 | 85.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 119 | 87.20 | temperature | 25 | 1440 | > th | dose dependent | sin | 3 | NA |
| 226 | 87.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 241 | 87.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 15 |
| 514 | 88.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 574 | 88.94 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 594 | 89.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 15 |
| 756 | 89.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 923 | 89.89 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 962 | 90.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |