Os11g0526800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0526800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.4 | 0.447 | 6.89 | 1.62 | 0.391 | 2.24 | 0.31 | -0.318 | 0.25 | 3.05 | 28.81 | 20 | -- | -- |
| 89.9 | 0.442 | 6.88 | 1.59 | 0.465 | 2.27 | 0.234 | -- | 0.284 | 2.62 | 27.46 | 59 | -- | -- |
| 90.44 | 0.443 | 6.9 | 1.58 | 0.395 | 2.26 | -- | -0.0728 | 0.242 | 2.88 | 28.62 | 41 | -- | -- |
| 90.13 | 0.442 | 6.9 | 1.57 | 0.466 | 2.25 | -- | -- | 0.251 | 2.83 | 27.47 | 50 | -- | -- |
| 96.05 | 0.456 | 6.88 | 1.67 | -- | 2.62 | -- | -0.0227 | 0.306 | -- | 29.37 | 33 | -- | -- |
| 160.59 | 0.594 | 7.01 | 1.02 | 1.12 | -- | 0.493 | -- | -0.233 | 2.56 | -- | -- | -- | -- |
| 161.46 | 0.595 | 7.01 | 1.01 | 1.12 | -- | -- | -- | -0.236 | 2.58 | -- | -- | -- | -- |
| 95.97 | 0.456 | 6.88 | 1.66 | -- | 2.62 | -- | -- | 0.304 | -- | 29.46 | 27 | -- | -- |
| 147.89 | 0.569 | 6.96 | -- | 0.677 | 1.59 | -- | -- | -0.0439 | 3.03 | 27.47 | 50 | -- | -- |
| 235.15 | 0.717 | 7 | 1.06 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 188.45 | 0.642 | 7.03 | -- | 1.14 | -- | -- | -- | -0.349 | 2.59 | -- | -- | -- | -- |
| 162.94 | 0.596 | 6.95 | -- | -- | 2.15 | -- | -- | 0.0319 | -- | 29.46 | 27 | -- | -- |
| 264.77 | 0.759 | 7.03 | -- | -- | -- | -- | -- | -0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 87.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 4 | 88.81 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 88.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 8 | 89.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 9 | 90.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 10 | 90.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 13 | 90.73 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 14 | 90.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 23 | 91.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 25 | 91.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 41 | 93.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 43 | 93.53 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 61 | 94.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 86 | 94.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 126 | 96.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 142 | 96.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 176 | 98.24 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 200 | 98.93 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 262 | 99.99 | temperature | 25 | 10 | < th | dose dependent | sin | 19 | NA |
| 302 | 100.73 | temperature | 15 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 381 | 101.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 464 | 103.38 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 570 | 105.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 591 | 105.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 621 | 106.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 645 | 106.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 817 | 108.56 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 21 |