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Os11g0521900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CTD phosphatase-like 3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.85 (0.015) R2 : 0.596
β1 : 1.32 (0.0551) R2dD : 0.527 R2D : 0.352
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.46 (0.0321) R2dN8 : 0.244 R2N8 : 0.0687
σ : 0.282
deviance : 36.52
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.95 0.23 9.81 1.22 0.395 0.00773 -0.607 1.56 0.46 5.05 0.1586 4362 -- --
24.96 0.233 9.84 1.2 0.399 0.353 -0.594 -- 0.469 5.08 0.5304 3225 -- --
24.88 0.232 9.81 1.23 0.386 -0.0019 -- 1.56 0.463 5.09 0.1759 4359 -- --
24.36 0.23 9.84 1.07 0.41 0.416 -- -- 0.491 5.2 0.6579 21964 -- --
32.75 0.267 9.81 1.26 -- -0.0892 -- 1.88 0.47 -- 0.2333 3645 -- --
27.47 0.246 9.84 1.3 0.401 -- -0.539 -- 0.448 5.04 -- -- -- --
28.2 0.249 9.84 1.31 0.398 -- -- -- 0.45 5.14 -- -- -- --
32.97 0.267 9.84 1.06 -- 0.414 -- -- 0.503 -- 0.5149 22519 -- --
39.4 0.292 9.83 -- 0.432 0.784 -- -- 0.495 4.99 1.01 47220 -- --
36.52 0.282 9.85 1.32 -- -- -- -- 0.46 -- -- -- -- --
73.13 0.4 9.88 -- 0.421 -- -- -- 0.305 5.03 -- -- -- --
49.15 0.327 9.84 -- -- 0.776 -- -- 0.501 -- 1.092 47520 -- --
82.47 0.424 9.88 -- -- -- -- -- 0.314 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.35 wind 1.0 14400 > th dose independent rect. 19 10
3 23.52 wind 1.0 14400 > th dose independent rect. 21 8
12 23.71 wind 1.0 14400 < th dose independent rect. 16 14
13 23.73 precipitation 0.1 4320 > th dose dependent rect. 11 6
14 23.74 radiation 1.0 270 > th dose independent rect. 16 23
16 23.75 precipitation 0.1 4320 > th dose dependent rect. 13 14
21 23.78 humidity 80.0 1440 < th dose independent rect. 11 1
22 23.78 precipitation 0.1 4320 > th dose dependent rect. 11 3
23 23.79 humidity 80.0 1440 > th dose independent rect. 11 1
24 23.79 wind 1.0 14400 < th dose independent rect. 18 11
26 23.81 precipitation 0.1 4320 > th dose dependent rect. 13 11
40 23.84 radiation 1.0 1440 < th dose dependent rect. 16 2
41 23.84 radiation 1.0 43200 < th dose dependent rect. 24 3
57 23.86 atmosphere 995.0 43200 < th dose independent rect. 14 10
63 23.87 humidity 90.0 270 > th dose dependent rect. 4 23
65 23.88 atmosphere 995.0 43200 > th dose independent rect. 14 10
67 23.88 wind 3.0 14400 < th dose dependent rect. 2 1
70 23.89 atmosphere 995.0 43200 > th dose independent rect. 13 13
71 23.89 precipitation 0.1 4320 > th dose dependent sin 16 NA
83 23.90 atmosphere 995.0 43200 < th dose independent rect. 13 13
96 23.91 radiation 1.0 720 < th dose dependent rect. 5 13
105 23.92 wind 1.0 14400 > th dose independent rect. 9 21
117 23.93 humidity 80.0 1440 < th dose independent rect. 9 10
128 23.94 precipitation 0.1 4320 > th dose independent rect. 13 9
129 23.94 precipitation 0.1 4320 < th dose independent rect. 13 9
133 23.94 radiation 1.0 43200 < th dose dependent rect. 24 1
134 23.94 atmosphere 995.0 43200 < th dose dependent rect. 15 8
136 23.94 precipitation 0.1 4320 < th dose dependent rect. 13 9
143 23.94 humidity 80.0 270 > th dose dependent rect. 1 22
148 23.95 precipitation 0.1 4320 < th dose independent rect. 12 15
150 23.95 precipitation 0.1 4320 < th dose dependent rect. 12 15
156 23.95 precipitation 0.1 4320 > th dose dependent rect. 19 23
157 23.96 atmosphere 1000.0 43200 > th dose independent rect. 16 2
162 23.96 precipitation 0.1 4320 > th dose independent rect. 12 15
173 23.96 precipitation 0.1 4320 > th dose dependent rect. 2 23
175 23.97 precipitation 0.1 4320 > th dose independent sin 18 NA
177 23.97 precipitation 0.1 4320 < th dose independent sin 18 NA
179 23.97 humidity 80.0 1440 > th dose independent rect. 9 10
185 23.97 wind 1.0 14400 > th dose independent rect. 19 17
187 23.97 precipitation 0.1 4320 < th dose dependent sin 18 NA
196 23.97 precipitation 0.1 4320 > th dose dependent rect. 15 23
197 23.98 atmosphere 995.0 43200 > th dose independent sin 16 NA
199 23.98 atmosphere 1000.0 43200 < th dose independent rect. 16 2
206 23.98 precipitation 0.1 4320 > th dose dependent no NA NA
207 23.98 atmosphere 1005.0 43200 < th dose dependent rect. 14 1
264 24.01 atmosphere 995.0 43200 < th dose independent sin 16 NA
281 24.01 atmosphere 1005.0 43200 < th dose dependent rect. 6 1
291 24.01 atmosphere 1005.0 43200 < th dose dependent rect. 5 15
294 24.02 humidity 90.0 1440 > th dose independent rect. 18 4
306 24.02 atmosphere 1005.0 43200 < th dose dependent rect. 8 12
307 24.02 atmosphere 1005.0 43200 < th dose dependent rect. 6 13
336 24.03 precipitation 0.1 4320 > th dose independent rect. 7 20
337 24.03 precipitation 0.1 4320 < th dose independent rect. 7 20
338 24.03 atmosphere 1005.0 43200 < th dose dependent sin 22 NA
345 24.03 atmosphere 1005.0 43200 < th dose dependent rect. 9 10
363 24.03 atmosphere 1000.0 43200 < th dose dependent rect. 13 19
369 24.03 precipitation 0.1 4320 < th dose dependent rect. 7 20
374 24.04 precipitation 0.1 4320 > th dose independent rect. 12 5
412 24.04 precipitation 0.1 4320 > th dose dependent rect. 15 12
417 24.04 atmosphere 1000.0 43200 < th dose dependent rect. 13 14
447 24.05 atmosphere 1000.0 43200 > th dose independent rect. 19 1
472 24.05 radiation 1.0 43200 < th dose dependent rect. 22 6
483 24.05 atmosphere 1000.0 43200 < th dose dependent rect. 14 12
511 24.05 precipitation 0.1 4320 > th dose dependent rect. 21 23
519 24.06 precipitation 0.1 4320 < th dose independent rect. 12 5
538 24.06 wind 1.0 14400 < th dose independent rect. 9 21
541 24.06 atmosphere 1000.0 43200 < th dose dependent sin 8 NA
542 24.06 atmosphere 1000.0 43200 < th dose dependent sin 16 NA
546 24.06 atmosphere 1005.0 43200 < th dose dependent rect. 17 1
547 24.06 atmosphere 1005.0 43200 < th dose dependent rect. 19 1
554 24.06 precipitation 0.1 4320 < th dose dependent rect. 12 5
558 24.06 radiation 1.0 43200 < th dose dependent rect. 20 8
568 24.06 atmosphere 1000.0 43200 < th dose dependent rect. 22 12
576 24.06 atmosphere 1000.0 43200 < th dose dependent rect. 20 15
604 24.07 radiation 1.0 1440 < th dose independent rect. 16 2
643 24.07 humidity 90.0 720 > th dose dependent rect. 7 15
653 24.07 humidity 80.0 30 > th dose dependent rect. 5 18
689 24.08 precipitation 0.1 4320 > th dose independent rect. 7 17
696 24.08 atmosphere 1005.0 43200 < th dose dependent no NA NA
764 24.08 atmosphere 1005.0 43200 < th dose dependent rect. 19 23
770 24.09 precipitation 0.1 4320 > th dose independent rect. 12 2
801 24.09 humidity 90.0 270 > th dose independent rect. 1 21
805 24.09 radiation 1.0 270 < th dose dependent sin 1 NA
806 24.09 precipitation 0.1 43200 > th dose dependent rect. 19 1
863 24.09 humidity 90.0 270 > th dose dependent rect. 16 22
888 24.10 wind 1.0 14400 > th dose independent sin 12 NA
916 24.10 precipitation 0.1 4320 > th dose independent rect. 4 23
917 24.10 precipitation 0.1 4320 < th dose independent rect. 4 23
918 24.10 humidity 90.0 270 > th dose dependent no NA NA
991 24.10 humidity 90.0 270 > th dose dependent rect. 13 23
998 24.10 precipitation 0.1 4320 < th dose dependent rect. 4 23
1000 24.11 wind 1.0 43200 < th dose independent rect. 5 2