Os11g0521500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acyl carrier protein, chloroplast precursor (ACP) (ACP05) (Clone 29C08).
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Os11g0521500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acyl carrier protein, chloroplast precursor (ACP) (ACP05) (Clone 29C08).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.56 | 0.503 | 10.1 | 0.83 | 1.34 | 1.35 | -0.652 | -0.0409 | -0.377 | 1.43 | 26.3 | 248 | -- | -- |
| 114.54 | 0.498 | 10.1 | 0.834 | 1.34 | 1.36 | -0.645 | -- | -0.376 | 1.41 | 26.3 | 239 | -- | -- |
| 116.05 | 0.502 | 10.1 | 0.932 | 1.35 | 1.3 | -- | 0.812 | -0.359 | 1.31 | 26.3 | 205 | -- | -- |
| 116.18 | 0.502 | 10.1 | 0.851 | 1.37 | 1.4 | -- | -- | -0.376 | 1.34 | 26.3 | 206 | -- | -- |
| 173.11 | 0.613 | 10.1 | 0.619 | -- | 1.36 | -- | -0.596 | -0.54 | -- | 24.4 | 951 | -- | -- |
| 145.86 | 0.566 | 10.1 | 1.03 | 1.08 | -- | -0.683 | -- | -0.339 | 0.00541 | -- | -- | -- | -- |
| 147.84 | 0.569 | 10.1 | 1.06 | 1.08 | -- | -- | -- | -0.336 | 23.9 | -- | -- | -- | -- |
| 173.52 | 0.614 | 10.1 | 0.726 | -- | 1.28 | -- | -- | -0.464 | -- | 24.51 | 940 | -- | -- |
| 134.43 | 0.54 | 10.1 | -- | 1.46 | 1.56 | -- | -- | -0.489 | 1.52 | 25.82 | 203 | -- | -- |
| 221.93 | 0.696 | 10.1 | 1.09 | -- | -- | -- | -- | -0.321 | -- | -- | -- | -- | -- |
| 177.21 | 0.623 | 10.1 | -- | 1.1 | -- | -- | -- | -0.453 | 24 | -- | -- | -- | -- |
| 187.36 | 0.638 | 10.1 | -- | -- | 1.44 | -- | -- | -0.544 | -- | 24.7 | 963 | -- | -- |
| 253.18 | 0.743 | 10.1 | -- | -- | -- | -- | -- | -0.442 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 19 |
| 13 | 102.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 14 | 102.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 15 | 102.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 18 | 102.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 20 | 102.39 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 53 | 103.03 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 54 | 103.03 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 56 | 103.03 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 62 | 103.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 77 | 103.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 78 | 103.27 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 79 | 103.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 85 | 103.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 86 | 103.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 93 | 103.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 122 | 103.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 161 | 103.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 193 | 103.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 22 |
| 201 | 103.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 203 | 103.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 274 | 103.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 275 | 103.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 277 | 103.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 292 | 104.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 22 |
| 296 | 104.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 299 | 104.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 21 |
| 394 | 104.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 397 | 104.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 13 |
| 411 | 104.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 510 | 104.53 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 511 | 104.53 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 517 | 104.53 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 537 | 104.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 539 | 104.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 542 | 104.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 580 | 104.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 12 |
| 599 | 104.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 10 |
| 644 | 104.77 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 14 | NA |
| 741 | 104.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 821 | 105.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 16 |
| 865 | 105.45 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 894 | 105.57 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 901 | 105.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |