Os11g0514100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATP-binding region, ATPase-like domain containing protein.
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Os11g0514100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATP-binding region, ATPase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.15 | 0.302 | 2.06 | -1.76 | 0.00906 | 92 | 0.171 | 194 | 0.0147 | 4.06 | 15 | 90 | -- | -- |
| 45.49 | 0.317 | 2.86 | -0.136 | 0.0162 | 0.0385 | -0.294 | -- | -1.7e-05 | 13.9 | 15 | 90 | -- | -- |
| 42.23 | 0.303 | 2.06 | -1.76 | 0.0107 | 92.1 | -- | 194 | 0.0139 | 5.11 | 15 | 90 | -- | -- |
| 43.9 | 0.311 | 2.86 | -0.0834 | 0.0219 | -0.639 | -- | -- | 0.014 | 10.1 | 15.4 | 136 | -- | -- |
| 42.24 | 0.303 | 2.05 | -1.77 | -- | 92.3 | -- | 195 | 0.0141 | -- | 15.04 | 91 | -- | -- |
| 45.49 | 0.316 | 2.86 | -0.135 | 0.0169 | -- | -0.298 | -- | 0.000394 | 13.9 | -- | -- | -- | -- |
| 45.81 | 0.317 | 2.86 | -0.144 | 0.0247 | -- | -- | -- | -0.00162 | 10.4 | -- | -- | -- | -- |
| 43.93 | 0.31 | 2.86 | -0.0836 | -- | -0.64 | -- | -- | 0.014 | -- | 15.7 | 144 | -- | -- |
| 44.08 | 0.311 | 2.86 | -- | 0.0221 | -0.681 | -- | -- | 0.0239 | 10.4 | 15.4 | 136 | -- | -- |
| 45.85 | 0.316 | 2.86 | -0.145 | -- | -- | -- | -- | -0.0017 | -- | -- | -- | -- | -- |
| 46.36 | 0.319 | 2.86 | -- | 0.0257 | -- | -- | -- | 0.0145 | 10.8 | -- | -- | -- | -- |
| 44.11 | 0.31 | 2.86 | -- | -- | -0.683 | -- | -- | 0.0239 | -- | 15.99 | 179 | -- | -- |
| 46.4 | 0.318 | 2.86 | -- | -- | -- | -- | -- | 0.0143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.77 | temperature | 20 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 2 | 36.79 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 8 | 37.36 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 4 |
| 29 | 39.42 | humidity | 60 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 38 | 39.59 | humidity | 60 | 10 | < th | dose independent | rect. | 18 | 16 |
| 44 | 39.66 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 50 | 39.71 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 66 | 39.71 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 79 | 39.72 | temperature | 20 | 270 | < th | dose independent | rect. | 12 | 1 |
| 80 | 39.72 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 106 | 39.72 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 110 | 39.72 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 139 | 39.73 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 171 | 39.73 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 203 | 39.73 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 299 | 39.74 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 305 | 39.75 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 319 | 39.78 | temperature | 20 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 340 | 39.81 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 401 | 39.91 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 563 | 40.11 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 7 |
| 593 | 40.23 | radiation | 1 | 270 | < th | dose independent | rect. | 10 | 5 |
| 594 | 40.23 | radiation | 1 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 619 | 40.32 | radiation | 1 | 90 | < th | dose independent | rect. | 14 | 1 |
| 621 | 40.32 | radiation | 1 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 626 | 40.36 | wind | 1 | 10 | < th | dose dependent | sin | 22 | NA |
| 649 | 40.45 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 680 | 40.50 | temperature | 20 | 30 | < th | dose dependent | rect. | 14 | 2 |
| 685 | 40.51 | temperature | 20 | 90 | < th | dose independent | rect. | 14 | 2 |
| 719 | 40.57 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 750 | 40.64 | humidity | 80 | 10 | > th | dose dependent | rect. | 11 | 6 |
| 878 | 40.82 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 889 | 40.85 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 970 | 40.92 | temperature | 20 | 10 | < th | dose dependent | sin | 22 | NA |