BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0514100 Os11g0514100|Os11g0514100
(1674 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48770.1 | chr3:18079261-18086817 REVERSE LENGTH=1900 1430 0.0
AT3G28020.1 | chr3:10417906-10419149 REVERSE LENGTH=247 175 2e-43
AT4G13750.1 | chr4:7975191-7987558 FORWARD LENGTH=2730 154 3e-37
>AT3G48770.1 | chr3:18079261-18086817 REVERSE LENGTH=1900
Length = 1899
Score = 1430 bits (3701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/1697 (46%), Positives = 1073/1697 (63%), Gaps = 72/1697 (4%)
Query: 24 NPLAEDMHQAVNYLSQEIYSKDVHFLMELIQNAEDNDYPSGVAPSLEFLITSKDITGLGA 83
NPL ED+HQAV LS E+Y+KDVHFLMELIQNAEDN+YP GV PSLEF+ITS+DIT GA
Sbjct: 215 NPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNEYPEGVDPSLEFVITSEDITNTGA 274
Query: 84 PSTLLIFNNEKGFSPSNVESICRVGKSTKKGNRHQGYIGEKGIGFKSVFLISRQPHIFSN 143
P+TLLIFNNEKGFS N+ESIC VG+STKKGNR GYIGEKGIGFKSVFLI+ QP+IFSN
Sbjct: 275 PATLLIFNNEKGFSEKNIESICSVGRSTKKGNRKCGYIGEKGIGFKSVFLITSQPYIFSN 334
Query: 144 GYRIKFNEDPSSECNIGYIVPEWVESKPSLSDIQELHGSSKPLPTTTIILPLKSEKVDVV 203
GY+I+FNE P S C++GYIVPEWV+ PSL DIQ ++GS LPTTTIILPLKS+KV V
Sbjct: 335 GYQIRFNEAPCSHCSLGYIVPEWVDQHPSLVDIQRMYGSGSALPTTTIILPLKSDKVKPV 394
Query: 204 KKQLSSIHPEILLFLTKIRRLSVREDNSDPKCSTINEISMESEKNYQVRKNIHAESYTLH 263
K+QLS++HPE+LLFL+KI+RLS+RE DPK ST+N I + SE N+ RK+I AESYT+H
Sbjct: 395 KEQLSNVHPEVLLFLSKIKRLSIREHCLDPKLSTVNSIGIVSETNFVTRKSIDAESYTIH 454
Query: 264 LSAQE---NKEQEECGYYMWRQKFPVKPENRVDMRADIDEYVITLAFPHGQRLSRGKQSS 320
LSA E N EQ EC YYMWRQKFPVK ENRVD R++++E+VITLAFP G+RL G +S
Sbjct: 455 LSASEKGKNSEQ-ECSYYMWRQKFPVKHENRVDRRSEVEEWVITLAFPFGERLGHG-NNS 512
Query: 321 PGVYAFLPTEILTNFPFIIQADFLLASSRETILFDSMWNKGILECVPSAFLNAFVALVKS 380
PG+YAFLPTE++TNFPFIIQADF+LASSRE IL D +WN+GIL CVP AFLNAF +LVK+
Sbjct: 513 PGIYAFLPTEMVTNFPFIIQADFILASSREMILLDDIWNQGILNCVPLAFLNAFTSLVKT 572
Query: 381 SADAPAMSLPSMFNFLPVHPSHVPFLEPVRSAIKDKVRTENIMPCESYTLQKMFCKPGEV 440
+ DAP SL F FLPV S+ L VR +I+ +V E I+P S+ QK F KP EV
Sbjct: 573 T-DAPVSSLLPAFRFLPVKESNYAKLNVVRESIRARVCAEEIVPSISHQGQKFFYKPCEV 631
Query: 441 GRIKPGFWTILKKAQECGVDLKNLSAHGTYILSCHFDKSTYDSVLAFLDVKNVSAKWYAK 500
GR+ P FW IL+KA G L+N+S+HG YIL+ FD++ YD+VL FL +K VS +WY K
Sbjct: 632 GRLIPTFWDILEKAGSEGASLQNISSHGIYILNSAFDRTEYDNVLNFLGLKQVSNEWYVK 691
Query: 501 CIEGSNLVYELPEELYIEFLYFLATNWD-SFSSTSMKSIPLLKYVDRYGAPTFWSIYKAS 559
CI+G +LV + E Y+E L F+A NW F +T+M +PL+KYV + G + S+ S
Sbjct: 692 CIQGCDLVTSVSEATYVEVLLFIAENWQCRFQNTNMGKVPLIKYVVQKGVSSLSSLGGFS 751
Query: 560 QSSGRLCISSHKKYIQWLISWNQEFPSCNQF-FMPLSTQTALYDFSKNTFVTNWLRWHVN 618
+ LC+S+ K WL+ WN EF + F FMP +T+TAL SK + WL+ +V
Sbjct: 752 PRT--LCLSTEKNQ-AWLLDWNDEFRCMSNFVFMPPTTRTALKVCSKKEIIHTWLKENVK 808
Query: 619 VQVVSVHGYGLNIIAKLLDHDRRSIVAFAHFLYHSFKMGHIEGYFVTQLCHAMPIINIYG 678
V +SV Y + + + L+ D+R +VA+AHFL+HS + + C MP+++ YG
Sbjct: 809 VITLSVSDYAKH-LRENLNGDKRLVVAYAHFLHHSISKDFLSKEEAGKCCKDMPLVDNYG 867
Query: 679 KVVKTKTNIVVPAKGSKWVRLMGTNPWKDEKYTVLAADYMSSGSFARKSTPDGRLFKFLT 738
V ++ ++VPA KWV L+G+NPW+ Y L+ +Y+ S FA + L FL
Sbjct: 868 NVNISRNGVLVPASAGKWVSLVGSNPWRHSGYIELSEEYLLSNRFAGLRSNKKDLLGFLK 927
Query: 739 KHLQVSDVPSIDPPDASFPTVSSQLTVDNAXXXXXXXXXXKSRGVELPAKFMDCIRRGSW 798
++ D+P I+PP+ + P +S LT +N K L + F++ +R GSW
Sbjct: 928 SSVEAGDIPDIEPPNVAIPALSGPLTKENV--LLLLEWINKCNRHSLRSNFLNSVRGGSW 985
Query: 799 LVTSVGD----RPPSESFMSSAEWTGLLQIGSSFVDIPIIDQQFYQNKLNVYKEELKTIG 854
L T++ RPPS+SF ++ W +LQ GS VDIP++D+ +Y N++ YKEELK G
Sbjct: 986 LRTTMNGVSDYRPPSQSFYHTSSWGSILQNGSILVDIPLVDRSYYGNEIEKYKEELKIAG 1045
Query: 855 VRFEFQEASVYIGSHLMSIAESNMLTRDNVYSLLQLIRFLQENNLSTSALVDSVNSGQWM 914
V FEF E ++G+HLMS+AE++ + NV+S+L+ IR+L+E LS + + +V +G W+
Sbjct: 1046 VMFEFSEVCRFVGNHLMSLAETSTQSSANVFSILKFIRYLREKRLSPADFITAVKNGPWL 1105
Query: 915 KSTLGYRSPANCIIYDSDWAVASRISILPFLDVQFYG-DSILDYKPELELLGVLVGFKDN 973
K+ GYRSP +++ +W AS IS +PF+D FYG S+ YK ELELLGV+V F DN
Sbjct: 1106 KTISGYRSPDGAVLFSEEWKAASLISDIPFIDRGFYGVVSLNGYKEELELLGVVVKFPDN 1165
Query: 974 YTTVIDNFEFSS-NAISSEATVLILKCVRYVSPCDDFITKLKDIKWIKTNV-GFCVPSES 1031
Y+ ++ + + ++ +A L+L C+R +SP + KT G+ P+E
Sbjct: 1166 YSLIVSHLNTAKLTYLTPDAMFLVLDCMRQLSPHRLINALWNSSQCFKTKKNGYKSPAEC 1225
Query: 1032 FLIDPEWECLLKVFGEVALIDLGFYGSVISSYKEELKKTGLIAGHLEASNALALLFKQMV 1091
F+ DPEW CLL VF LID FYGS I +YK ELK+ G+ EA FKQ
Sbjct: 1226 FIPDPEWTCLLSVFDCFPLIDDDFYGSRIFAYKGELKQIGVKLQLEEAVKMFVSTFKQKA 1285
Query: 1092 SKSSLTKANVLALLASYRQL-KSHQPSPMKLFNCLRDEKWLHTSQG-FRRPSDAILFDES 1149
S LT+ +LL+ Y++L S P +L + +WLHT G FR P D ILFD
Sbjct: 1286 ISSGLTRCTASSLLSCYKKLMGSLYKYPEELMKSFKQFQWLHTKLGDFRAPKDCILFDSE 1345
Query: 1150 WWLLSPIASLPFINDEDTGYGLGLEIYDYKDELKDLGVTVEVKDGANFVIVNLKIPNDQS 1209
W L IA+LPFI+D YG I++++ EL+ LGVTVE++ G + VI +L +P D S
Sbjct: 1346 WEPLRLIANLPFIDDGPNWYGKS--IHEFRKELESLGVTVELRKGMSHVISSLSLP-DPS 1402
Query: 1210 AVPAYTVLSLLECIQNWIACQV-SLPKDFLDKICKKWLRTTMGYKSPNECLLFDHK-HSA 1267
+ + LSL CI+ + LPK+ LDK+ KWL+T GY+SP ECLLFD
Sbjct: 1403 RIAPSSALSLFRCIKFLREDRFQQLPKELLDKVSVKWLKTHAGYRSPEECLLFDRTWKLE 1462
Query: 1268 ICMEDGPFIDEVFYGSEIASFKDALAAIGVVINIENGCDLVAQHMKFHSCSDTISRIYMY 1327
C DGPFIDE +YGS+I SF++ L AIGV + + C L+A+++ S +D ISR+Y +
Sbjct: 1463 PC--DGPFIDEEYYGSDINSFREELIAIGVGHDSDKACQLLARNVYKLSETDAISRVYRF 1520
Query: 1328 LMDCNWKPVNN-SSNWVWVPSGIQSGEWVSPANCVLHDRDNLFSSQLHVLDKYY----NK 1382
L + WKP SS +W+PS +W ++CVL D+D LF S+ +VL+ +Y +
Sbjct: 1521 LSEAEWKPEKGASSGRIWIPS---DEKWADISSCVLFDKDKLFGSKFNVLENHYCSGKDH 1577
Query: 1383 KVLGFFALVLGVRFNPNAEDHCKLWSKWEALVTELTMADCSAFWGFVLENW-TKATENLL 1441
+LGFF+ GVR NP+ ED+C+LW WE L+ +C AFW FV+ + T E LL
Sbjct: 1578 NLLGFFSSAFGVRINPSIEDYCELWKYWEKTKNRLSSHECCAFWSFVVRHGDTVKAEKLL 1637
Query: 1442 SACVIKVPVF-----NESKIILSKKEDVXXXXXXXXXXXXXXXXQESIFIWYPPASLPYM 1496
S ++PV N ++LS DV +F+WYP S+P +
Sbjct: 1638 SESFSRLPVHSPDCNNNDGVMLSSISDV---FIADDLLLKDMFIDSPVFVWYPTPSIPTL 1694
Query: 1497 SRARFNCIYNSIGVRTISESVEWNESFTLG-DTGLQEV--NVSTVIKHGLLQIVTAFLAN 1553
SR R IY +IGV+ +S+ VE E+ G T LQEV +I GL++++ AFL++
Sbjct: 1695 SRTRLIEIYRNIGVKEVSKCVEIAEADLTGFKTELQEVVDPKKNLIGPGLVKLILAFLSD 1754
Query: 1554 PVLDIPAKERHKMVSHLLSVTILETNEPITAGYSVKLSSG-------------------- 1593
P L + ER +++ L+ + + ET+E IT Y++ L S
Sbjct: 1755 PSLKVETAERLRIIHSLVDIDVKETSETITTEYTLSLPSKGEKLIAKAKRMIRWEREKGV 1814
Query: 1594 --RHRCDQETSHRGKIEFATYFADEISQGLLFEMEDHIPELTELVKFGYLLDFQDSAVEF 1651
+ ++ R +E+AT FA+ I++G+++E ED I L+ELVK YL++F + A+EF
Sbjct: 1815 VYAEKMEKTCGKRKLLEYATCFAEVIAKGVMWEREDLIGRLSELVKMAYLVEFDEEALEF 1874
Query: 1652 LLKSKNLQLFPEDEEFL 1668
L+KSKNLQ++ EDE+ +
Sbjct: 1875 LMKSKNLQVYEEDEKLI 1891
>AT3G28020.1 | chr3:10417906-10419149 REVERSE LENGTH=247
Length = 246
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 145/268 (54%), Gaps = 61/268 (22%)
Query: 157 CNIGYIVPEWVESKPSLSDIQELHGSSKPLPTTTIILPLKSEKVDVVKKQLSSIHPEILL 216
CN+GYIVPEWVE +PSL DIQ+++G +PTTTII+PLKS+KV VK+QLS++HPEI
Sbjct: 37 CNLGYIVPEWVEKRPSLVDIQKINGFGSAIPTTTIIMPLKSDKVKPVKEQLSNVHPEI-- 94
Query: 217 FLTKIRRLSVREDNSDPKCSTINEISMESEKNYQVRKNIHAESYTLHLSAQENKEQEECG 276
+ K S +N + SE N RK+I AES
Sbjct: 95 -------------HYQDKVSIVNSHGIVSETNLVSRKSIDAES----------------- 124
Query: 277 YYMWRQKFPVKPENRVDMRADIDEYVITLAFPHGQRLSRGKQSSPGVYAFLPTEILTNFP 336
QK VK ENRV R +++E + TL F G RL+ G P +YAFLPTE+
Sbjct: 125 -----QKLTVKNENRVGRRGEVEELLTTLVFLLGDRLALGDSFPPSIYAFLPTEM----- 174
Query: 337 FIIQADFLLASSRETILFDSMWNKGILECVPSAFLNAFVALVKSSADAPAMSLPSMFNFL 396
+L+ R D MWN+GIL CVPSAF+NAF +LVK + DA F+FL
Sbjct: 175 ------EILSLHR----LDDMWNQGILSCVPSAFVNAFTSLVKKT-DA--------FSFL 215
Query: 397 PVHPSHVPFLEPVRSAIKDKVRTENIMP 424
PV S+ L VR +I +V E +P
Sbjct: 216 PVKVSNYEELNDVRESIMARVLAEGNVP 243
>AT4G13750.1 | chr4:7975191-7987558 FORWARD LENGTH=2730
Length = 2729
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 198/413 (47%), Gaps = 57/413 (13%)
Query: 30 MHQAVNYLSQEIYSKDVHFLMELIQNAEDNDYPSGVAPSLEFLITSKDITGLGAPSTLLI 89
+ +A+ LSQE+YS+D HF++EL+QNA+DN YP V P+L F++ I ++
Sbjct: 1191 LGRALQCLSQELYSQDSHFILELVQNADDNKYPEHVEPTLTFILQKTGI---------VV 1241
Query: 90 FNNEKGFSPSNVESICRVGKSTKKGNRHQGYIGEKGIGFKSVFLISRQPHIFSNGYRIKF 149
NNE GF P N+ ++C VG+STKKG+ KGIGFKSVF +S P I SNG+ KF
Sbjct: 1242 LNNECGFMPENIRALCDVGQSTKKGSGGYIGK--KGIGFKSVFRVSDAPEIHSNGFHFKF 1299
Query: 150 NEDPSSECNIGYIVPEWV-----ESKPSLSDIQELHGSSKPLPTTTIILPLK---SEKVD 201
+ SE IGYI+P V ES S+ + LH T I LP + SE+
Sbjct: 1300 D---ISEGQIGYILPTVVPPHDIESLSSMLSGRALHLKDAGW-NTCITLPFRAIDSERTT 1355
Query: 202 V--VKKQLSSIHPEILLFLTKIRRLSVREDNSDPKCSTINEISMESEKNYQVRKNIHAES 259
V ++ S +HP +LLFL +++ + R D E+ V KNI
Sbjct: 1356 VNHIEPMFSDLHPSLLLFLHRLQCIVYRNVLDDSLLVMRKEV---------VSKNI---- 1402
Query: 260 YTLHLSAQENKEQEECGYYMWRQKFPVKPENRVDMRADIDEYVITLAFPHGQRLSRGKQS 319
+ +S EN +++ +K ++R D+ I++ F L G
Sbjct: 1403 --VKVSCGENS----MTWFVASEKLKA-----TNLRDDVQTTEISIGFTLDM-LEDGTYR 1450
Query: 320 S----PGVYAFLPTEILTNFPFIIQADFLLASSRETILFDSMWNKGILECVPSAFLNAFV 375
S V+AFLP FIIQ DF+L SSRE + DS WN+ +L P F++A
Sbjct: 1451 SCMIQEPVFAFLPLRTY-GLKFIIQGDFILTSSREDVDEDSPWNQWLLSEFPGLFVDALR 1509
Query: 376 AL--VKSSADAPAMSLPSMFNFLPVHPSHVPFLEPVRSAIKDKVRTENIMPCE 426
+ + S + S +P+ F + +I ++RT N + E
Sbjct: 1510 SFCSLPSFTQNLGKGVSSYMQLVPLVGEVHGFFSSLPRSIISRLRTTNCLLLE 1562
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 37,613,470
Number of extensions: 1648475
Number of successful extensions: 3560
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3500
Number of HSP's successfully gapped: 3
Length of query: 1674
Length of database: 11,106,569
Length adjustment: 112
Effective length of query: 1562
Effective length of database: 8,035,977
Effective search space: 12552196074
Effective search space used: 12552196074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 119 (50.4 bits)