Os11g0513700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0513700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.53 | 0.531 | 7.66 | 0.267 | 0.65 | 1.19 | 0.397 | 1.04 | -0.232 | 16.8 | 24 | 821 | -- | -- |
| 128.84 | 0.529 | 7.63 | 0.429 | 0.649 | 1.06 | 0.425 | -- | -0.187 | 16.7 | 24.7 | 820 | -- | -- |
| 127.93 | 0.527 | 7.66 | 0.264 | 0.651 | 1.19 | -- | 1.05 | -0.234 | 16.7 | 23.99 | 827 | -- | -- |
| 129.28 | 0.53 | 7.64 | 0.429 | 0.654 | 1.04 | -- | -- | -0.19 | 16.7 | 24.67 | 815 | -- | -- |
| 148.24 | 0.567 | 7.65 | 0.244 | -- | 1.26 | -- | 1.18 | -0.212 | -- | 25.1 | 1057 | -- | -- |
| 144.73 | 0.564 | 7.68 | 0.128 | 0.67 | -- | 0.374 | -- | -0.405 | 15.9 | -- | -- | -- | -- |
| 145.13 | 0.564 | 7.68 | 0.133 | 0.672 | -- | -- | -- | -0.403 | 15.9 | -- | -- | -- | -- |
| 149.86 | 0.57 | 7.62 | 0.448 | -- | 1.15 | -- | -- | -0.173 | -- | 25.3 | 1057 | -- | -- |
| 133.49 | 0.538 | 7.65 | -- | 0.654 | 0.862 | -- | -- | -0.269 | 16.6 | 24.41 | 778 | -- | -- |
| 169.85 | 0.609 | 7.68 | 0.106 | -- | -- | -- | -- | -0.421 | -- | -- | -- | -- | -- |
| 145.6 | 0.564 | 7.68 | -- | 0.669 | -- | -- | -- | -0.417 | 15.9 | -- | -- | -- | -- |
| 154.41 | 0.579 | 7.64 | -- | -- | 0.943 | -- | -- | -0.259 | -- | 25.3 | 1040 | -- | -- |
| 170.14 | 0.609 | 7.68 | -- | -- | -- | -- | -- | -0.432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.07 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 8 | 117.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 12 | 117.58 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 15 | 117.67 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 24 | 118.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 25 | 118.46 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 27 | 118.63 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 31 | 118.75 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 63 | 120.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 67 | 120.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 68 | 120.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 69 | 120.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 76 | 120.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 78 | 121.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 79 | 121.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 80 | 121.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 92 | 121.37 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 93 | 121.42 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 108 | 121.76 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 130 | 122.90 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 145 | 123.06 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 158 | 123.12 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 180 | 123.31 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 196 | 123.55 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 216 | 123.68 | temperature | 20.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 220 | 123.73 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 223 | 123.77 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 231 | 123.81 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 238 | 123.84 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 252 | 123.92 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 272 | 124.01 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 303 | 124.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 306 | 124.15 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 313 | 124.18 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 321 | 124.22 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 329 | 124.27 | temperature | 30.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 342 | 124.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 370 | 124.50 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 11 | 20 |
| 381 | 124.55 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 399 | 124.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 429 | 124.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 449 | 124.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 454 | 124.96 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 479 | 125.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 500 | 125.26 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 506 | 125.30 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 508 | 125.32 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 528 | 125.48 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 543 | 125.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 544 | 125.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 545 | 125.53 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 564 | 125.64 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 570 | 125.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 577 | 125.73 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 587 | 125.77 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 608 | 125.92 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 609 | 125.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 611 | 125.94 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 626 | 126.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 631 | 126.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 634 | 126.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 642 | 126.07 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 662 | 126.15 | radiation | 10.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 689 | 126.25 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 11 | 8 |
| 691 | 126.25 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 11 | 12 |
| 693 | 126.26 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 704 | 126.26 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 11 | 16 |
| 726 | 126.30 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 732 | 126.32 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 739 | 126.34 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 8 |
| 747 | 126.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 754 | 126.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 770 | 126.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 796 | 126.47 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 800 | 126.49 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 829 | 126.55 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 837 | 126.56 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 838 | 126.56 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 6 | 6 |
| 841 | 126.57 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 843 | 126.57 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 844 | 126.58 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 846 | 126.58 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 850 | 126.58 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 852 | 126.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 14 |
| 853 | 126.59 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 854 | 126.59 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 856 | 126.59 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 858 | 126.59 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 866 | 126.60 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 867 | 126.60 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 882 | 126.61 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 897 | 126.61 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 933 | 126.64 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 958 | 126.66 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 968 | 126.66 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 991 | 126.67 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 992 | 126.67 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |