Os11g0496400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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Os11g0496400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Octicosapeptide/Phox/Bem1p domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.26 | 0.626 | 2.9 | 0.419 | 0.284 | 0.953 | 0.387 | 1.97 | 0.0406 | 13 | 19.3 | 135 | -- | -- |
| 186.72 | 0.641 | 2.86 | 0.587 | 0.276 | 0.56 | -0.123 | -- | 0.0768 | 12.4 | 19.27 | 125 | -- | -- |
| 176.67 | 0.619 | 2.88 | 0.483 | 0.254 | 1.08 | -- | 2.04 | 0.0649 | 13.3 | 19.19 | 236 | -- | -- |
| 186.79 | 0.641 | 2.86 | 0.581 | 0.276 | 0.555 | -- | -- | 0.0754 | 12.3 | 19.27 | 125 | -- | -- |
| 180.47 | 0.626 | 2.91 | 0.456 | -- | 1.08 | -- | 2.25 | 0.0374 | -- | 19.17 | 256 | -- | -- |
| 195.81 | 0.656 | 2.88 | 0.415 | 0.169 | -- | 0.0361 | -- | -0.00369 | 11.9 | -- | -- | -- | -- |
| 195.82 | 0.655 | 2.88 | 0.417 | 0.169 | -- | -- | -- | -0.00349 | 12 | -- | -- | -- | -- |
| 190.45 | 0.643 | 2.86 | 0.598 | -- | 0.571 | -- | -- | 0.0742 | -- | 19.3 | 260 | -- | -- |
| 195.04 | 0.654 | 2.87 | -- | 0.241 | 0.411 | -- | -- | -0.00499 | 12.1 | 19.2 | 87 | -- | -- |
| 197.61 | 0.657 | 2.88 | 0.411 | -- | -- | -- | -- | -0.00582 | -- | -- | -- | -- | -- |
| 200.39 | 0.662 | 2.89 | -- | 0.164 | -- | -- | -- | -0.0499 | 11.8 | -- | -- | -- | -- |
| 198.4 | 0.656 | 2.88 | -- | -- | 0.342 | -- | -- | -0.0118 | -- | 19.2 | 89 | -- | -- |
| 202.08 | 0.664 | 2.89 | -- | -- | -- | -- | -- | -0.0515 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.67 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 3 | 165.69 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 167.01 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 6 | 169.52 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 7 | 169.88 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 8 | 170.03 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 9 | 170.11 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 11 | 170.68 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 19 | 171.02 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 39 | 171.62 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 43 | 171.88 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 68 | 172.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 83 | 173.56 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 85 | 173.57 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 88 | 173.60 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 89 | 173.60 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 91 | 173.60 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 129 | 173.63 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 130 | 173.63 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 147 | 173.65 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 159 | 173.70 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 229 | 173.88 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 236 | 173.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 10 |
| 259 | 174.07 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 262 | 174.08 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 264 | 174.09 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 278 | 174.12 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 301 | 174.22 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 312 | 174.24 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 320 | 174.28 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 358 | 174.50 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 359 | 174.50 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 24 | 6 |
| 364 | 174.53 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 379 | 174.56 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 381 | 174.57 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 384 | 174.62 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 387 | 174.65 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 414 | 174.82 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 419 | 174.85 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 482 | 175.20 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 489 | 175.24 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 497 | 175.29 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 523 | 175.51 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 588 | 176.08 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 591 | 176.13 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 598 | 176.18 | temperature | 20.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 617 | 176.29 | temperature | 20.0 | 720 | < th | dose independent | rect. | 14 | 7 |
| 632 | 176.34 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 639 | 176.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 640 | 176.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 661 | 176.43 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 669 | 176.46 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 674 | 176.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 718 | 176.69 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 720 | 176.70 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 729 | 176.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 730 | 176.75 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 735 | 176.77 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 753 | 176.85 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 761 | 176.88 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 769 | 176.92 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 807 | 177.08 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 863 | 177.24 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 891 | 177.30 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 18 | 11 |
| 919 | 177.37 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 934 | 177.41 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 22 | 7 |