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Os11g0491400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.53 (0.0281) R2 : 0.337
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.11 (0.0734) R2dC : 0.337 R2C : 0.336
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0532 (0.0592) R2dN8 : 0.00152 R2N8 : 0.000147
σ : 0.53
deviance : 128.53
__
_____
C
peak time of C : 6.76
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.6 0.478 8.61 -0.14 1.39 3.26 5.24 5.68 0.0629 17.3 0.9329 769 -- --
109.68 0.488 8.56 0.033 0.945 2.79 0.995 -- 0.142 17.6 1.506 801 -- --
119.76 0.514 8.54 -0.192 1.11 -0.0442 -- -1.08 0.035 6.59 0.9329 769 -- --
111.68 0.492 8.56 0.0236 0.935 2.84 -- -- 0.134 18.3 1.569 830 -- --
120.61 0.512 8.53 -0.361 -- 1.47 -- -1.56 0.109 -- 1.903 806 -- --
127.39 0.529 8.54 -0.204 1.12 -- -0.113 -- 0.0298 6.72 -- -- -- --
127.42 0.529 8.54 -0.205 1.12 -- -- -- 0.0303 6.75 -- -- -- --
114.19 0.498 8.56 -0.148 -- 2.07 -- -- 0.173 -- 2.028 2261 -- --
111.68 0.492 8.57 -- 0.966 2.89 -- -- 0.145 18.4 1.556 830 -- --
192.62 0.649 8.56 -0.18 -- -- -- -- 0.0523 -- -- -- -- --
128.53 0.53 8.53 -- 1.11 -- -- -- 0.0532 6.76 -- -- -- --
113.07 0.495 8.53 -- -- 2.01 -- -- 0.204 -- 2.04 2275 -- --
193.47 0.649 8.56 -- -- -- -- -- 0.0722 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.60 wind 7.0 14400 > th dose independent rect. 11 1
2 91.60 wind 7.0 14400 < th dose independent rect. 11 1
3 92.11 wind 9.0 14400 > th dose independent rect. 6 5
4 92.98 wind 7.0 14400 > th dose dependent rect. 10 2
14 94.39 radiation 1.0 720 < th dose dependent rect. 5 12
19 94.74 precipitation 0.1 14400 < th dose independent rect. 4 2
20 94.74 precipitation 0.1 14400 < th dose dependent rect. 4 2
24 95.12 precipitation 0.1 14400 > th dose dependent rect. 4 2
26 95.20 precipitation 0.1 14400 > th dose independent rect. 4 2
33 95.73 wind 7.0 14400 > th dose dependent rect. 5 8
37 95.87 wind 9.0 14400 < th dose independent rect. 5 7
42 96.02 precipitation 0.1 14400 > th dose independent rect. 19 1
48 96.18 precipitation 0.1 14400 < th dose independent rect. 19 1
49 96.18 precipitation 0.1 14400 < th dose dependent rect. 19 1
59 96.66 wind 9.0 14400 < th dose independent rect. 2 11
69 96.82 wind 9.0 14400 < th dose independent rect. 24 13
70 96.82 wind 7.0 14400 > th dose dependent rect. 7 6
85 97.46 humidity 90.0 720 > th dose dependent rect. 5 16
95 97.70 wind 3.0 14400 < th dose independent rect. 2 2
97 97.70 humidity 90.0 14400 > th dose dependent rect. 2 19
100 97.75 precipitation 0.1 14400 > th dose independent rect. 17 1
102 97.79 precipitation 0.1 14400 < th dose independent rect. 17 1
103 97.79 precipitation 0.1 14400 < th dose dependent rect. 17 1
110 97.89 wind 7.0 14400 > th dose dependent rect. 24 13
119 97.99 precipitation 0.1 4320 > th dose independent rect. 23 18
122 98.10 precipitation 0.1 4320 < th dose independent rect. 23 18
123 98.10 precipitation 0.1 4320 < th dose dependent rect. 23 18
132 98.28 precipitation 0.1 4320 > th dose independent rect. 2 15
134 98.36 wind 3.0 14400 > th dose independent rect. 2 2
143 98.49 precipitation 0.1 4320 < th dose independent rect. 2 15
144 98.49 precipitation 0.1 4320 < th dose dependent rect. 2 15
145 98.52 precipitation 0.1 14400 > th dose dependent rect. 19 1
176 99.21 humidity 90.0 720 > th dose dependent sin 23 NA
186 99.36 humidity 90.0 14400 > th dose dependent sin 1 NA
190 99.47 humidity 90.0 14400 > th dose dependent rect. 7 23
210 99.70 precipitation 0.1 4320 > th dose dependent rect. 22 19
220 99.74 humidity 90.0 14400 > th dose dependent rect. 15 19
221 99.74 humidity 90.0 14400 > th dose dependent rect. 12 22
222 99.74 humidity 90.0 14400 > th dose dependent rect. 15 23
230 99.79 precipitation 0.1 4320 > th dose independent sin 5 NA
241 99.84 precipitation 0.1 4320 < th dose independent sin 5 NA
243 99.84 humidity 90.0 14400 > th dose dependent no NA NA
244 99.84 precipitation 0.1 4320 < th dose dependent sin 5 NA
246 99.85 humidity 90.0 14400 > th dose dependent rect. 18 23
257 99.89 humidity 90.0 14400 > th dose dependent rect. 5 23
258 99.91 precipitation 0.1 14400 > th dose dependent rect. 17 1
291 100.07 precipitation 0.1 4320 > th dose dependent rect. 2 15
313 100.16 humidity 90.0 14400 > th dose dependent rect. 5 5
322 100.19 precipitation 0.1 4320 > th dose independent rect. 2 12
323 100.19 radiation 1.0 14400 < th dose dependent rect. 7 3
364 100.43 precipitation 0.1 4320 < th dose independent rect. 2 12
365 100.43 precipitation 0.1 4320 < th dose dependent rect. 2 12
382 100.50 wind 9.0 14400 < th dose independent sin 5 NA
387 100.51 humidity 90.0 14400 > th dose dependent rect. 12 18
426 100.66 precipitation 0.1 4320 < th dose independent rect. 3 6
428 100.66 precipitation 0.1 4320 < th dose dependent rect. 3 6
430 100.66 humidity 90.0 14400 > th dose dependent rect. 15 15
436 100.69 humidity 90.0 14400 > th dose independent rect. 4 6
460 100.81 humidity 90.0 14400 > th dose independent rect. 2 19
465 100.83 precipitation 0.1 4320 > th dose dependent rect. 2 12
481 100.91 humidity 90.0 14400 > th dose independent rect. 6 2
490 100.95 humidity 90.0 14400 > th dose dependent rect. 3 8
504 101.00 humidity 90.0 14400 > th dose dependent rect. 3 11
521 101.06 wind 1.0 14400 > th dose dependent rect. 2 2
531 101.08 wind 3.0 43200 < th dose dependent rect. 24 4
536 101.10 humidity 90.0 14400 > th dose dependent sin 14 NA
559 101.20 precipitation 0.1 4320 > th dose dependent sin 6 NA
566 101.23 humidity 90.0 14400 > th dose independent rect. 2 23
571 101.25 humidity 90.0 14400 > th dose independent rect. 15 19
572 101.25 humidity 90.0 14400 > th dose independent rect. 12 22
627 101.42 humidity 90.0 720 > th dose independent rect. 4 17
638 101.45 humidity 90.0 14400 > th dose independent rect. 15 23
639 101.45 humidity 80.0 14400 < th dose dependent rect. 5 2
646 101.47 humidity 90.0 14400 > th dose independent rect. 18 20
677 101.52 humidity 90.0 14400 > th dose independent rect. 6 23
686 101.54 humidity 90.0 720 > th dose independent rect. 5 15
691 101.55 radiation 1.0 720 < th dose independent rect. 5 12
703 101.57 humidity 90.0 14400 > th dose independent no NA NA
705 101.57 wind 1.0 43200 < th dose independent rect. 19 9
726 101.62 wind 3.0 43200 < th dose independent rect. 24 7
746 101.65 radiation 1.0 720 < th dose dependent rect. 4 22
755 101.68 humidity 90.0 14400 > th dose independent rect. 9 23
767 101.73 humidity 80.0 14400 < th dose independent rect. 2 5
778 101.75 wind 5.0 14400 < th dose dependent rect. 2 2
786 101.79 precipitation 0.1 4320 > th dose dependent rect. 2 7
790 101.80 wind 9.0 14400 > th dose independent sin 5 NA
802 101.83 humidity 80.0 14400 > th dose independent rect. 2 3
817 101.85 precipitation 0.1 4320 < th dose independent rect. 23 12
820 101.85 precipitation 0.1 4320 < th dose dependent rect. 23 12
821 101.86 humidity 80.0 14400 < th dose independent rect. 4 3
823 101.86 humidity 70.0 720 > th dose dependent rect. 18 19
887 102.05 humidity 80.0 14400 > th dose independent rect. 4 1
891 102.06 humidity 90.0 14400 > th dose independent rect. 3 11
916 102.13 humidity 80.0 14400 < th dose independent rect. 5 1
917 102.13 humidity 90.0 14400 > th dose independent rect. 12 16
942 102.19 humidity 90.0 14400 > th dose independent sin 15 NA
960 102.23 humidity 90.0 14400 > th dose independent rect. 15 13
967 102.25 humidity 90.0 14400 > th dose independent sin 3 NA
977 102.27 precipitation 0.1 4320 > th dose independent rect. 23 12
990 102.29 humidity 90.0 720 > th dose independent sin 0 NA
998 102.29 wind 1.0 43200 < th dose dependent rect. 19 10