Os11g0484000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Class II aldolase/adducin, N-terminal family protein.
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Os11g0484000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Class II aldolase/adducin, N-terminal family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.68 | 0.243 | 13.5 | -0.435 | 0.563 | -0.22 | 0.0422 | -1.28 | 0.0575 | 21.6 | 29.83 | 1225 | -- | -- |
| 26.74 | 0.241 | 13.5 | -0.214 | 0.567 | -0.354 | -5.86e-05 | -- | 0.084 | 21.5 | 29.19 | 1233 | -- | -- |
| 26.69 | 0.241 | 13.5 | -0.433 | 0.563 | -0.221 | -- | -1.26 | 0.0575 | 21.6 | 29.88 | 1225 | -- | -- |
| 26.72 | 0.241 | 13.5 | -0.212 | 0.566 | -0.363 | -- | -- | 0.0762 | 21.6 | 29.04 | 1241 | -- | -- |
| 44.54 | 0.311 | 13.5 | -0.555 | -- | -0.105 | -- | -2.19 | 0.069 | -- | 30.44 | 1534 | -- | -- |
| 33.11 | 0.27 | 13.5 | -0.315 | 0.536 | -- | -0.0333 | -- | 0.128 | 21.3 | -- | -- | -- | -- |
| 33.11 | 0.269 | 13.5 | -0.314 | 0.536 | -- | -- | -- | 0.128 | 21.3 | -- | -- | -- | -- |
| 44.43 | 0.31 | 13.5 | -0.215 | -- | -0.345 | -- | -- | 0.0875 | -- | 30.3 | 5869 | -- | -- |
| 27.8 | 0.246 | 13.5 | -- | 0.574 | -0.416 | -- | -- | 0.144 | 21.6 | 27.73 | 1263 | -- | -- |
| 49.84 | 0.33 | 13.5 | -0.311 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 35.7 | 0.28 | 13.5 | -- | 0.536 | -- | -- | -- | 0.163 | 21.2 | -- | -- | -- | -- |
| 43.69 | 0.308 | 13.4 | -- | -- | -0.348 | -- | -- | 0.21 | -- | 33.5 | 7301 | -- | -- |
| 52.4 | 0.338 | 13.4 | -- | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.52 | temperature | 15 | 90 | > th | dose independent | rect. | 9 | 18 |
| 2 | 26.12 | temperature | 15 | 270 | > th | dose independent | rect. | 7 | 18 |
| 3 | 26.19 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 4 | 26.20 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 5 | 26.27 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 6 | 26.28 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 9 | 26.31 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 16 | 26.42 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 18 | 26.44 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 32 | 26.60 | temperature | 30 | 90 | < th | dose independent | rect. | 9 | 18 |
| 34 | 26.63 | temperature | 15 | 270 | > th | dose independent | rect. | 19 | 17 |
| 38 | 26.65 | wind | 9 | 43200 | > th | dose independent | sin | 10 | NA |
| 42 | 26.69 | temperature | 15 | 90 | > th | dose independent | rect. | 19 | 8 |
| 43 | 26.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 45 | 26.73 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 17 |
| 52 | 26.78 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 56 | 26.83 | wind | 9 | 43200 | < th | dose independent | sin | 10 | NA |
| 63 | 26.85 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 65 | 26.86 | wind | 9 | 43200 | > th | dose dependent | sin | 11 | NA |
| 66 | 26.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 68 | 26.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 75 | 26.89 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 91 | 26.94 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 93 | 26.95 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 101 | 26.96 | temperature | 30 | 1440 | < th | dose independent | sin | 10 | NA |
| 103 | 26.96 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 105 | 26.96 | temperature | 30 | 1440 | > th | dose dependent | sin | 23 | NA |
| 110 | 26.96 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 111 | 26.96 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 6 |
| 113 | 26.96 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 228 | 26.96 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 238 | 26.97 | temperature | 30 | 1440 | > th | dose dependent | sin | 9 | NA |
| 239 | 26.97 | temperature | 30 | 1440 | > th | dose dependent | sin | 21 | NA |
| 262 | 26.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 306 | 26.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 307 | 26.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 308 | 26.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 310 | 26.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 376 | 27.01 | wind | 7 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 377 | 27.01 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 406 | 27.03 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 437 | 27.04 | temperature | 30 | 1440 | > th | dose independent | sin | 10 | NA |
| 449 | 27.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 474 | 27.06 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 493 | 27.06 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 16 |
| 531 | 27.08 | wind | 1 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 533 | 27.08 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 550 | 27.10 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 558 | 27.12 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 559 | 27.12 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 644 | 27.17 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 645 | 27.17 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 699 | 27.19 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 712 | 27.19 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 713 | 27.19 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 729 | 27.21 | wind | 7 | 43200 | > th | dose dependent | sin | 9 | NA |
| 733 | 27.21 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 736 | 27.22 | wind | 5 | 43200 | > th | dose dependent | sin | 4 | NA |
| 743 | 27.23 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 5 |
| 761 | 27.24 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 763 | 27.24 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 785 | 27.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 809 | 27.26 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 835 | 27.26 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 840 | 27.27 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 937 | 27.28 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 939 | 27.28 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 941 | 27.28 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 949 | 27.28 | temperature | 15 | 270 | > th | dose independent | rect. | 17 | 9 |