Os11g0470500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF26 domain containing protein.
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Os11g0470500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF26 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.71 | 0.541 | 3.03 | -0.116 | 0.124 | 2.79 | -0.153 | 4.9 | 0.216 | 11.5 | 9.124 | 29 | -- | -- |
| 132.57 | 0.536 | 3.02 | -0.166 | 0.124 | 1.72 | 0.00903 | -- | 0.214 | 10.4 | 9.4 | 18 | -- | -- |
| 132.77 | 0.537 | 3.03 | -0.124 | 0.128 | 2.76 | -- | 4.69 | 0.215 | 10.7 | 9.1 | 28 | -- | -- |
| 132.57 | 0.536 | 3.02 | -0.166 | 0.124 | 1.7 | -- | -- | 0.215 | 10.6 | 9.391 | 18 | -- | -- |
| 133.77 | 0.539 | 3.03 | -0.122 | -- | 2.81 | -- | 4.69 | 0.216 | -- | 9.124 | 28 | -- | -- |
| 139.32 | 0.553 | 3.02 | -0.231 | 0.149 | -- | -0.303 | -- | 0.187 | 13.1 | -- | -- | -- | -- |
| 139.55 | 0.553 | 3.02 | -0.243 | 0.157 | -- | -- | -- | 0.184 | 11.7 | -- | -- | -- | -- |
| 133.51 | 0.538 | 3.02 | -0.166 | -- | 1.75 | -- | -- | 0.215 | -- | 9.382 | 18 | -- | -- |
| 133.23 | 0.538 | 3.01 | -- | 0.121 | 1.85 | -- | -- | 0.238 | 10.6 | 9.243 | 18 | -- | -- |
| 141.09 | 0.555 | 3.03 | -0.248 | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
| 141.1 | 0.556 | 3.02 | -- | 0.16 | -- | -- | -- | 0.211 | 11.8 | -- | -- | -- | -- |
| 134.12 | 0.539 | 3.01 | -- | -- | 1.91 | -- | -- | 0.238 | -- | 9.235 | 18 | -- | -- |
| 142.71 | 0.558 | 3.02 | -- | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.60 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 3 | 124.07 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 5 | 125.65 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 3 |
| 7 | 126.13 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 11 | 126.65 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 15 |
| 20 | 127.16 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 23 | 127.26 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 51 | 127.47 | wind | 9.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 57 | 127.87 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 58 | 127.87 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 61 | 127.97 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 73 | 127.97 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 91 | 128.14 | wind | 9.0 | 30 | > th | dose independent | rect. | 21 | 15 |
| 95 | 128.21 | wind | 9.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 97 | 128.25 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 100 | 128.31 | wind | 9.0 | 30 | < th | dose independent | sin | 7 | NA |
| 103 | 128.44 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 116 | 128.69 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 161 | 129.25 | wind | 9.0 | 30 | > th | dose independent | sin | 7 | NA |
| 231 | 130.23 | radiation | 20.0 | 10 | < th | dose independent | rect. | 20 | 17 |
| 341 | 131.38 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 344 | 131.45 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 346 | 131.50 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 348 | 131.50 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 354 | 131.58 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 367 | 131.62 | wind | 9.0 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 383 | 131.66 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 20 | 17 |
| 387 | 131.69 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 390 | 131.69 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 400 | 131.80 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 451 | 132.15 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 509 | 132.29 | radiation | 30.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 531 | 132.46 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 570 | 132.77 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 574 | 132.79 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 604 | 132.94 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 638 | 133.07 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 684 | 133.14 | wind | 7.0 | 10 | < th | dose independent | rect. | 12 | 23 |
| 735 | 133.19 | wind | 3.0 | 30 | > th | dose independent | rect. | 11 | 15 |
| 747 | 133.22 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 748 | 133.23 | humidity | 60.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 779 | 133.29 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 788 | 133.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 791 | 133.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 795 | 133.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 801 | 133.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 802 | 133.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 822 | 133.32 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 823 | 133.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 831 | 133.34 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 835 | 133.35 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 837 | 133.36 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 839 | 133.36 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 849 | 133.39 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 864 | 133.42 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 876 | 133.43 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 884 | 133.44 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 889 | 133.46 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 891 | 133.46 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 892 | 133.46 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 895 | 133.46 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 896 | 133.46 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 898 | 133.46 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 903 | 133.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 904 | 133.46 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 905 | 133.46 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 906 | 133.46 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 911 | 133.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 916 | 133.49 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 917 | 133.49 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 920 | 133.49 | wind | 9.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 955 | 133.55 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |