FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0459700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0258) R2 : 0.00835
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.106 (0.0542) R2dN8 : 0.0108 R2N8 : 0.00835
σ : 0.485
deviance : 107.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
104.97 0.481 2.87 -0.000542 0.211 0.34 -0.154 -0.22 0.114 21.2 81 674 -- --
105.05 0.477 2.87 -0.0146 0.208 0.337 -0.0631 -- 0.112 21 80 670 -- --
105.03 0.477 2.87 -0.00237 0.212 0.341 -- -0.123 0.114 21 80.57 670 -- --
105.06 0.477 2.87 -0.0116 0.211 0.338 -- -- 0.112 21 80.06 670 -- --
106.37 0.48 2.86 0.00269 -- 0.355 -- -0.26 0.131 -- 80.15 1416 -- --
107.53 0.486 2.86 -0.0283 0.0738 -- -0.191 -- 0.101 2.98 -- -- -- --
107.65 0.486 2.86 -0.0241 0.0728 -- -- -- 0.102 2.78 -- -- -- --
106.42 0.48 2.86 -0.0144 -- 0.352 -- -- 0.126 -- 80 1414 -- --
105.07 0.477 2.87 -- 0.211 0.339 -- -- 0.113 20.9 80.01 670 -- --
107.96 0.486 2.86 -0.021 -- -- -- -- 0.104 -- -- -- -- --
107.66 0.485 2.86 -- 0.0723 -- -- -- 0.105 2.78 -- -- -- --
106.42 0.48 2.86 -- -- 0.352 -- -- 0.127 -- 80.66 1414 -- --
107.97 0.485 2.86 -- -- -- -- -- 0.106 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 97.82 atmosphere 1015.0 1440 < th dose independent rect. 7 4
3 97.85 atmosphere 1015.0 1440 < th dose independent rect. 4 7
5 97.91 atmosphere 1015.0 1440 < th dose independent rect. 11 1
6 97.92 atmosphere 1015.0 1440 < th dose independent rect. 9 3
10 97.95 atmosphere 1015.0 1440 > th dose independent rect. 10 1
26 97.95 atmosphere 1015.0 1440 > th dose dependent rect. 10 1
49 101.46 humidity 90.0 90 > th dose dependent rect. 20 1
51 101.75 humidity 90.0 90 > th dose dependent rect. 20 3
59 102.35 atmosphere 1005.0 90 < th dose independent rect. 20 1
128 103.82 wind 1.0 270 < th dose dependent rect. 2 1
130 103.85 humidity 90.0 90 > th dose independent rect. 20 3
135 103.92 atmosphere 1010.0 10 > th dose independent rect. 24 10
136 103.93 radiation 40.0 1440 > th dose independent rect. 15 1
154 103.94 wind 9.0 43200 > th dose dependent rect. 10 2
155 103.95 radiation 40.0 1440 > th dose dependent rect. 15 1
172 103.96 atmosphere 1010.0 270 > th dose independent rect. 24 8
173 103.97 atmosphere 1010.0 270 > th dose independent rect. 5 3
184 104.03 atmosphere 1010.0 270 > th dose independent rect. 5 1
186 104.03 atmosphere 1010.0 90 > th dose independent rect. 8 1
187 104.03 atmosphere 1010.0 10 > th dose independent rect. 9 1
252 104.10 humidity 90.0 90 > th dose independent rect. 21 1
274 104.16 wind 3.0 30 > th dose independent rect. 9 1
279 104.18 humidity 90.0 10 > th dose independent rect. 21 1
289 104.22 wind 1.0 270 < th dose independent rect. 2 1
327 104.53 humidity 80.0 1440 < th dose independent rect. 19 1
329 104.58 radiation 30.0 4320 < th dose dependent rect. 21 1
330 104.59 humidity 50.0 4320 < th dose independent rect. 11 1
332 104.60 wind 9.0 43200 > th dose independent rect. 10 4
335 104.61 wind 9.0 43200 < th dose independent rect. 10 4
336 104.62 temperature 25.0 30 > th dose independent rect. 20 1
337 104.62 temperature 10.0 1440 > th dose independent rect. 21 1
340 104.62 temperature 30.0 1440 < th dose independent rect. 21 1
344 104.62 humidity 50.0 1440 > th dose independent rect. 21 1
350 104.62 atmosphere 995.0 1440 > th dose independent rect. 21 1
351 104.62 radiation 1.0 1440 < th dose independent rect. 21 1
371 104.62 temperature 10.0 1440 > th dose independent rect. 22 23
375 104.63 wind 3.0 30 > th dose independent rect. 20 1
376 104.63 humidity 80.0 1440 > th dose independent rect. 19 2
377 104.63 temperature 20.0 30 > th dose dependent rect. 20 1
380 104.63 radiation 40.0 43200 < th dose dependent rect. 21 1
409 104.69 wind 7.0 30 < th dose independent rect. 20 1
414 104.69 wind 1.0 30 > th dose dependent rect. 20 1
415 104.69 atmosphere 1005.0 30 > th dose dependent rect. 20 1
425 104.71 humidity 90.0 30 < th dose independent rect. 20 1
426 104.71 atmosphere 1005.0 30 > th dose independent rect. 20 1
435 104.72 temperature 10.0 30 > th dose independent rect. 20 1
437 104.72 temperature 30.0 30 < th dose independent rect. 20 1
438 104.72 humidity 50.0 30 > th dose independent rect. 20 1
443 104.72 atmosphere 995.0 30 > th dose independent rect. 20 1
446 104.72 radiation 1.0 30 < th dose independent rect. 20 1
451 104.72 precipitation 0.1 30 < th dose independent rect. 20 1
454 104.72 temperature 10.0 30 > th dose independent rect. 21 23
455 104.72 radiation 1.0 30 < th dose dependent rect. 20 1
460 104.72 precipitation 0.1 30 < th dose dependent rect. 20 1
464 104.74 atmosphere 995.0 43200 > th dose independent rect. 10 2
465 104.74 humidity 50.0 30 > th dose dependent rect. 20 1
471 104.75 wind 9.0 43200 > th dose dependent rect. 10 5
473 104.76 wind 9.0 30 < th dose dependent rect. 20 1
475 104.77 atmosphere 995.0 43200 < th dose independent rect. 10 1
484 104.77 atmosphere 995.0 43200 < th dose dependent rect. 10 1
490 104.78 humidity 80.0 720 > th dose independent rect. 7 14
493 104.78 atmosphere 995.0 43200 < th dose dependent rect. 10 5
499 104.80 humidity 90.0 30 < th dose dependent rect. 20 1
501 104.81 atmosphere 1015.0 30 < th dose dependent rect. 20 1
502 104.82 humidity 50.0 4320 > th dose independent rect. 11 1
504 104.82 humidity 50.0 4320 > th dose independent rect. 24 12
505 104.82 atmosphere 1010.0 270 > th dose dependent rect. 5 1
518 104.87 humidity 60.0 43200 > th dose independent rect. 19 2
519 104.87 temperature 15.0 30 > th dose independent rect. 23 10
526 104.88 wind 9.0 43200 > th dose dependent rect. 10 7
527 104.89 atmosphere 1010.0 10 > th dose independent sin 5 NA
530 104.89 humidity 50.0 4320 > th dose independent rect. 7 5
531 104.89 humidity 50.0 4320 > th dose independent rect. 4 8
537 104.90 humidity 50.0 4320 > th dose independent rect. 2 10
540 104.91 atmosphere 1010.0 30 < th dose independent rect. 23 21
543 104.92 humidity 60.0 43200 < th dose independent rect. 19 2
544 104.92 humidity 80.0 720 > th dose independent rect. 24 21
549 104.93 humidity 50.0 4320 > th dose independent rect. 18 18
556 104.94 humidity 80.0 720 > th dose independent rect. 2 19
561 104.95 humidity 80.0 720 > th dose independent rect. 4 17
562 104.95 humidity 80.0 720 > th dose independent rect. 19 21
563 104.95 humidity 80.0 720 < th dose independent rect. 12 21
567 104.96 atmosphere 1010.0 720 > th dose independent rect. 23 2
568 104.96 humidity 50.0 4320 > th dose independent rect. 9 3
577 104.97 wind 9.0 30 < th dose independent rect. 21 23
578 104.97 humidity 50.0 4320 < th dose dependent rect. 11 1
586 104.98 humidity 80.0 720 > th dose independent rect. 7 18
590 104.99 wind 3.0 30 > th dose independent rect. 9 14
592 104.99 humidity 80.0 720 > th dose independent rect. 7 22
608 105.01 humidity 80.0 720 > th dose independent rect. 7 20
620 105.03 humidity 80.0 720 > th dose independent rect. 12 1
656 105.04 humidity 70.0 43200 < th dose dependent rect. 20 1
659 105.04 wind 9.0 43200 > th dose dependent rect. 10 10
662 105.05 atmosphere 1010.0 90 < th dose independent rect. 23 14
666 105.05 humidity 80.0 720 > th dose independent rect. 11 22
668 105.05 humidity 80.0 720 < th dose independent rect. 19 22
680 105.06 precipitation 0.1 720 > th dose dependent rect. 13 1
682 105.07 humidity 70.0 43200 < th dose independent rect. 21 1
691 105.07 radiation 1.0 720 < th dose dependent rect. 5 22
692 105.08 humidity 80.0 720 > th dose independent sin 22 NA
697 105.08 temperature 30.0 30 < th dose dependent rect. 20 1
713 105.11 radiation 10.0 10 > th dose independent rect. 9 1
714 105.11 atmosphere 1010.0 720 > th dose independent rect. 22 5
739 105.14 atmosphere 995.0 43200 > th dose independent rect. 13 1
740 105.14 temperature 25.0 10 > th dose independent rect. 23 2
744 105.14 wind 9.0 43200 > th dose independent rect. 10 10
745 105.14 humidity 80.0 720 > th dose independent rect. 11 10
748 105.14 humidity 80.0 720 > th dose independent rect. 4 23
766 105.15 temperature 25.0 10 < th dose independent rect. 20 15
771 105.15 humidity 80.0 720 > th dose dependent rect. 12 2
773 105.16 humidity 80.0 720 > th dose independent no NA NA
787 105.17 precipitation 0.1 14400 < th dose independent rect. 2 4
788 105.17 wind 9.0 43200 < th dose independent rect. 10 10
792 105.17 temperature 25.0 10 > th dose independent rect. 5 15
795 105.17 precipitation 0.1 14400 < th dose dependent rect. 2 4
806 105.18 humidity 80.0 720 > th dose independent rect. 11 16
813 105.19 precipitation 0.1 14400 > th dose independent rect. 2 4
839 105.20 humidity 80.0 720 > th dose independent rect. 15 23
842 105.20 radiation 1.0 720 < th dose dependent rect. 11 20
845 105.21 precipitation 0.1 720 > th dose independent rect. 13 1
850 105.21 humidity 80.0 720 < th dose independent rect. 12 11
854 105.21 humidity 80.0 720 < th dose independent rect. 7 16
881 105.22 wind 9.0 43200 > th dose dependent rect. 10 12
916 105.23 radiation 1.0 720 < th dose dependent rect. 5 12
924 105.24 humidity 80.0 90 > th dose independent rect. 8 1
969 105.24 precipitation 0.1 14400 > th dose dependent rect. 2 5