Os11g0451700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dehydrin DHN1 (M3) (RAB-17 protein).
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Os11g0451700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dehydrin DHN1 (M3) (RAB-17 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.48 | 0.34 | 3.11 | -0.174 | 0.0138 | -0.495 | 0.205 | 2.18 | -0.00279 | 11.6 | 1.007 | 12 | -- | -- |
| 56.81 | 0.351 | 3.09 | -0.0983 | 0.0129 | -0.346 | 0.36 | -- | 0.0194 | 11.6 | 1.099 | 12 | -- | -- |
| 52.66 | 0.338 | 3.11 | -0.168 | 0.0124 | -0.496 | -- | 2.26 | -0.00236 | 11.6 | 1.011 | 12 | -- | -- |
| 57.36 | 0.353 | 3.09 | -0.095 | 0.0259 | -0.341 | -- | -- | 0.018 | 7.57 | 1.1 | 11 | -- | -- |
| 52.67 | 0.338 | 3.11 | -0.168 | -- | -0.493 | -- | 2.25 | -0.00284 | -- | 1.02 | 12 | -- | -- |
| 59.68 | 0.362 | 3.09 | -0.0487 | 0.102 | -- | -0.358 | -- | 0.0132 | 3.52 | -- | -- | -- | -- |
| 59.99 | 0.363 | 3.08 | -0.0425 | 0.111 | -- | -- | -- | 0.0151 | 4.88 | -- | -- | -- | -- |
| 57.39 | 0.353 | 3.09 | -0.0791 | -- | -0.349 | -- | -- | 0.0197 | -- | 1.098 | 11 | -- | -- |
| 57.52 | 0.353 | 3.08 | -- | 0.026 | -0.331 | -- | -- | 0.0274 | 7.58 | 1 | 11 | -- | -- |
| 60.64 | 0.364 | 3.09 | -0.0383 | -- | -- | -- | -- | 0.0179 | -- | -- | -- | -- | -- |
| 60.04 | 0.362 | 3.08 | -- | 0.111 | -- | -- | -- | 0.0198 | 4.9 | -- | -- | -- | -- |
| 57.55 | 0.353 | 3.08 | -- | -- | -0.34 | -- | -- | 0.0283 | -- | 1.077 | 11 | -- | -- |
| 60.68 | 0.364 | 3.08 | -- | -- | -- | -- | -- | 0.0222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.54 | wind | 1.0 | 30 | < th | dose dependent | rect. | 1 | 2 |
| 3 | 43.57 | wind | 1.0 | 30 | < th | dose independent | rect. | 1 | 2 |
| 45 | 46.66 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 72 | 48.47 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 2 |
| 75 | 48.58 | wind | 1.0 | 10 | < th | dose independent | sin | 17 | NA |
| 85 | 48.88 | wind | 1.0 | 10 | > th | dose independent | sin | 16 | NA |
| 91 | 49.03 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 99 | 49.20 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 100 | 49.22 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 116 | 49.37 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 118 | 49.38 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 120 | 49.39 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 123 | 49.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 125 | 49.40 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 126 | 49.40 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 130 | 49.40 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 132 | 49.40 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 137 | 49.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 139 | 49.40 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 142 | 49.40 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 147 | 49.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 150 | 49.50 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 172 | 49.78 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 207 | 50.00 | wind | 7.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 209 | 50.00 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 217 | 50.07 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 218 | 50.08 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 228 | 50.12 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 229 | 50.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 232 | 50.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 236 | 50.12 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 245 | 50.12 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 246 | 50.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 266 | 50.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 285 | 50.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 291 | 50.43 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 323 | 51.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 324 | 51.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 327 | 51.24 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 377 | 51.83 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 406 | 52.05 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 411 | 52.11 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 484 | 52.77 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 505 | 52.90 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 798 | 53.90 | wind | 1.0 | 10 | < th | dose independent | no | NA | NA |
| 874 | 54.23 | wind | 3.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 896 | 54.36 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 917 | 54.43 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 10 |
| 922 | 54.45 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 931 | 54.48 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 944 | 54.58 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 13 |
| 955 | 54.61 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 983 | 54.76 | wind | 1.0 | 10 | > th | dose independent | rect. | 23 | 23 |