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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0440200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Apyrase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.51 (0.0552) R2 : 0.818
β1 : -4.02 (0.209) R2dD : 0.17 R2D : -0.322
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.17 (0.158) R2dE : 0.0928 R2E : -0.431
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -5.56 (0.125) R2dN8 : 1.23 R2N8 : 0.616
σ : 1.01
deviance : 473.19
__
_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1010
memory length : 9962
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
432.14 0.977 8.42 -3.71 0.484 -2.85 2.9 -2.06 -5.41 8.22 1010 6002 -- --
442.27 0.979 8.48 -4.16 0.479 -2.64 3.01 -- -5.49 8.19 1010 5980 -- --
456.52 0.995 8.41 -3.62 0.517 -2.77 -- -2.24 -5.4 7.16 1010 6314 -- --
458.91 0.998 8.5 -4.02 0.539 -2.14 -- -- -5.58 7.1 1010 9951 -- --
470.2 1.01 8.44 -3.51 -- -2.87 -- -2.16 -5.39 -- 1010 5625 -- --
631.08 1.18 8.35 -3.18 0.521 -- 2.76 -- -4.92 8.12 -- -- -- --
652.41 1.2 8.35 -3.1 0.56 -- -- -- -4.93 6.95 -- -- -- --
473.19 1.01 8.51 -4.02 -- -2.17 -- -- -5.56 -- 1010 9962 -- --
833.58 1.34 8.33 -- 0.491 -1.44 -- -- -4.82 7.58 1007 11175 -- --
668.86 1.21 8.36 -3.09 -- -- -- -- -4.92 -- -- -- -- --
906.25 1.41 8.27 -- 0.527 -- -- -- -4.58 7.31 -- -- -- --
846.6 1.36 8.34 -- -- -1.46 -- -- -4.81 -- 1006 11169 -- --
921.02 1.42 8.29 -- -- -- -- -- -4.57 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 414.95 radiation 40.0 43200 < th dose dependent rect. 18 2
24 416.98 radiation 10.0 43200 < th dose dependent rect. 18 9
45 421.30 precipitation 0.1 43200 > th dose independent rect. 17 6
46 421.34 precipitation 0.1 43200 < th dose independent rect. 17 6
47 421.34 precipitation 0.1 43200 < th dose dependent rect. 17 6
48 421.96 atmosphere 1010.0 14400 > th dose independent rect. 15 1
49 422.03 precipitation 0.1 43200 < th dose independent rect. 17 4
50 422.03 precipitation 0.1 43200 < th dose dependent rect. 17 4
51 422.05 precipitation 0.1 43200 > th dose independent rect. 17 4
52 422.14 precipitation 0.1 43200 < th dose independent rect. 20 1
53 422.14 precipitation 0.1 43200 < th dose dependent rect. 20 1
57 422.31 precipitation 0.1 43200 > th dose independent rect. 20 1
58 422.64 precipitation 0.1 43200 > th dose dependent rect. 13 8
59 422.66 atmosphere 1010.0 14400 > th dose dependent rect. 16 1
60 422.85 humidity 80.0 43200 < th dose dependent rect. 17 1
61 423.17 precipitation 0.1 43200 > th dose dependent rect. 17 10
62 423.33 precipitation 0.1 43200 < th dose independent rect. 20 3
63 423.33 precipitation 0.1 43200 < th dose dependent rect. 20 3
66 423.49 humidity 80.0 43200 > th dose independent rect. 17 1
67 423.49 precipitation 0.1 43200 > th dose independent rect. 19 3
73 423.73 precipitation 0.1 43200 > th dose dependent rect. 13 14
76 423.91 precipitation 0.1 43200 < th dose independent rect. 13 10
77 423.91 precipitation 0.1 43200 < th dose dependent rect. 13 10
80 423.99 precipitation 0.1 43200 > th dose independent rect. 13 10
81 424.00 precipitation 0.1 43200 > th dose dependent rect. 13 10
105 424.63 humidity 80.0 43200 < th dose independent rect. 17 1
123 425.10 precipitation 0.1 43200 > th dose independent rect. 23 1
124 425.10 precipitation 0.1 43200 > th dose dependent rect. 23 1
148 425.54 precipitation 0.1 43200 > th dose dependent rect. 20 6
154 425.61 precipitation 0.1 43200 > th dose dependent rect. 13 5
158 425.69 precipitation 0.1 43200 < th dose independent rect. 23 1
159 425.69 precipitation 0.1 43200 < th dose dependent rect. 23 1
176 425.93 radiation 10.0 14400 > th dose dependent rect. 17 14
230 426.76 precipitation 0.1 43200 > th dose dependent sin 17 NA
284 427.99 atmosphere 1010.0 14400 > th dose dependent rect. 19 1
313 428.49 humidity 50.0 43200 < th dose independent rect. 11 1
347 429.21 precipitation 0.1 43200 < th dose independent rect. 16 2
349 429.21 precipitation 0.1 43200 < th dose dependent rect. 16 2
354 429.25 humidity 70.0 43200 < th dose independent rect. 16 6
373 429.62 radiation 10.0 14400 > th dose dependent rect. 6 1
376 429.66 precipitation 0.1 43200 > th dose independent rect. 16 2
398 429.90 precipitation 0.1 43200 < th dose independent rect. 13 5
399 429.90 precipitation 0.1 43200 < th dose dependent rect. 13 5
418 430.18 precipitation 0.1 43200 < th dose independent sin 17 NA
419 430.18 precipitation 0.1 43200 < th dose dependent sin 17 NA
421 430.20 precipitation 0.1 43200 > th dose independent sin 17 NA
428 430.30 precipitation 0.1 43200 > th dose independent rect. 13 5
459 430.93 atmosphere 1010.0 14400 < th dose independent rect. 15 1
499 431.79 precipitation 0.1 43200 > th dose dependent rect. 21 2
532 432.26 humidity 50.0 43200 < th dose dependent rect. 11 3
557 432.46 humidity 50.0 43200 < th dose independent rect. 18 20
561 432.50 humidity 60.0 43200 > th dose independent rect. 13 8
566 432.55 humidity 50.0 43200 > th dose independent rect. 19 19
567 432.55 humidity 50.0 43200 < th dose dependent rect. 18 20
592 432.78 humidity 50.0 43200 < th dose independent rect. 21 17
597 432.82 humidity 50.0 43200 < th dose independent rect. 3 11
604 432.87 humidity 50.0 43200 < th dose dependent rect. 8 6
607 432.89 humidity 50.0 43200 < th dose dependent rect. 3 11
627 432.99 humidity 50.0 43200 > th dose independent rect. 11 2
631 433.09 humidity 50.0 43200 > th dose independent rect. 3 11
633 433.12 humidity 50.0 43200 > th dose independent rect. 24 14
707 433.80 atmosphere 1010.0 14400 > th dose dependent sin 20 NA
719 433.96 atmosphere 1015.0 14400 < th dose independent rect. 16 8
733 434.07 humidity 50.0 43200 > th dose dependent rect. 18 1
741 434.13 atmosphere 1015.0 14400 > th dose independent rect. 16 8
779 434.32 humidity 60.0 43200 < th dose independent rect. 8 1
803 434.49 atmosphere 1015.0 14400 > th dose independent rect. 18 5
855 435.07 atmosphere 1015.0 14400 > th dose dependent rect. 23 1
864 435.15 atmosphere 1015.0 14400 > th dose independent rect. 19 3
865 435.15 humidity 50.0 43200 > th dose dependent rect. 17 5
931 435.73 atmosphere 1015.0 43200 < th dose independent rect. 21 1
939 435.81 atmosphere 1015.0 43200 > th dose independent rect. 21 1
967 436.03 radiation 10.0 14400 < th dose independent rect. 17 14