BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0440200 Os11g0440200|Os11g0440200
(390 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04080.1 | chr3:1068068-1070917 REVERSE LENGTH=472 337 8e-93
AT5G18280.2 | chr5:6050799-6054875 REVERSE LENGTH=631 335 3e-92
AT1G14250.1 | chr1:4868675-4871203 FORWARD LENGTH=489 125 5e-29
AT1G14240.1 | chr1:4865159-4867777 FORWARD LENGTH=484 124 9e-29
AT2G02970.1 | chr2:865395-868007 REVERSE LENGTH=556 122 3e-28
AT1G14230.1 | chr1:4861497-4863991 FORWARD LENGTH=504 113 2e-25
AT4G19180.1 | chr4:10485518-10487868 REVERSE LENGTH=741 72 5e-13
>AT3G04080.1 | chr3:1068068-1070917 REVERSE LENGTH=472
Length = 471
Score = 337 bits (863), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 237/364 (65%), Gaps = 3/364 (0%)
Query: 23 VKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQIL 82
+KPGLS+Y P+++ANS+ LL+KA+ VP++L+ +TP+++GATAGLR +G + SE IL
Sbjct: 107 LKPGLSAYPNDPRQSANSLVTLLDKAEASVPRELRPKTPVRVGATAGLRALGHQASENIL 166
Query: 83 EAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGS 142
+AVR+L+ +S + + ++VL G+QEGS WV +NYLL LG YS TVGV+DLGGGS
Sbjct: 167 QAVRELLKGRSRLKTEANAVTVLDGTQEGSYQWVTINYLLRTLGKPYSDTVGVVDLGGGS 226
Query: 143 VQMAYAISSDAAENAPPVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILKTKN 202
VQMAYAI + A AP G+D YV + YLKG+ Y LYVHSYLHYGL A+R EILK
Sbjct: 227 VQMAYAIPEEDAATAPKPVEGEDSYVREMYLKGRKYFLYVHSYLHYGLLAARAEILKVSE 286
Query: 203 GQFSSCMLRGFNGTYKYNGEEYDAAASPEGADHGKCXXXXXXX-XXXDAPCESRNCSFNG 261
+ C+ G+ GTYKY G+ + AAASP GA +C ++ C C+F G
Sbjct: 287 DSNNPCIATGYAGTYKYGGKAFKAAASPSGASLDECRRVAINALKVNNSLCTHMKCTFGG 346
Query: 262 VWNXXXXXXMADLYVASYFYDRAVHGGFVVDDAPSXXXXXXXXXXXXXXXCSLSSGEAAA 321
VWN ++VAS+F+DRA GFV + P C++ E +
Sbjct: 347 VWNGGGGGGQKKMFVASFFFDRAAEAGFVDPNQPVAEVRPLDFEKAANKACNMRMEEGKS 406
Query: 322 AYP--EAFDVQFICMDLTYQYTLLTKGFGLKPTREMTLVKQVKYGDCYVESAWPLGTAIE 379
+P E ++ ++C+DL YQYTLL GFGLKP++ +TLVK+VKYGD VE+AWPLG+AIE
Sbjct: 407 KFPRVEEDNLPYLCLDLVYQYTLLVDGFGLKPSQTITLVKKVKYGDYAVEAAWPLGSAIE 466
Query: 380 ALSS 383
A+SS
Sbjct: 467 AVSS 470
>AT5G18280.2 | chr5:6050799-6054875 REVERSE LENGTH=631
Length = 630
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 237/364 (65%), Gaps = 3/364 (0%)
Query: 23 VKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQIL 82
+KPGLS+Y P++AANS+ LL+KA+ VP++L+ +T +++GATAGLR +G + SE IL
Sbjct: 266 LKPGLSAYPTDPRQAANSLVSLLDKAEASVPRELRPKTHVRVGATAGLRTLGHDASENIL 325
Query: 83 EAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGS 142
+AVR+L+ +S + + ++VL G+QEGS WV +NYLL LG YS TVGV+DLGGGS
Sbjct: 326 QAVRELLRDRSMLKTEANAVTVLDGTQEGSYQWVTINYLLRNLGKPYSDTVGVVDLGGGS 385
Query: 143 VQMAYAISSDAAENAPPVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILKTKN 202
VQMAYAIS + A +AP G+D YV + YLKG+ Y LYVHSYLHYGL A+R EILK
Sbjct: 386 VQMAYAISEEDAASAPKPLEGEDSYVREMYLKGRKYFLYVHSYLHYGLLAARAEILKVSE 445
Query: 203 GQFSSCMLRGFNGTYKYNGEEYDAAASPEGADHGKCXXXXXXX-XXXDAPCESRNCSFNG 261
+ C++ G++G YKY G+E+ A AS GA +C D C C+F G
Sbjct: 446 DSENPCIVAGYDGMYKYGGKEFKAPASQSGASLDECRRITINALKVNDTLCTHMKCTFGG 505
Query: 262 VWNXXXXXXMADLYVASYFYDRAVHGGFVVDDAPSXXXXXXXXXXXXXXXCSLSSGEAAA 321
VWN +++VAS+F+DRA GFV P CS+ E +
Sbjct: 506 VWNGGRGGGQKNMFVASFFFDRAAEAGFVDPKQPVATVRPMDFEKAAKKACSMKLEEGKS 565
Query: 322 AYP--EAFDVQFICMDLTYQYTLLTKGFGLKPTREMTLVKQVKYGDCYVESAWPLGTAIE 379
+P E ++ ++CMDL YQYTLL GFGL+P++ +TLVK+VKYGD VE+AWPLG+AIE
Sbjct: 566 TFPLVEEENLPYLCMDLVYQYTLLIDGFGLEPSQTITLVKKVKYGDQAVEAAWPLGSAIE 625
Query: 380 ALSS 383
A+SS
Sbjct: 626 AVSS 629
>AT1G14250.1 | chr1:4868675-4871203 FORWARD LENGTH=489
Length = 488
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 14/187 (7%)
Query: 14 HYWQQGSMVVKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLI 73
HY S+ + PGLSSYA P+ A+ S+ L+E AKG +PK K++ ++L ATAG+RL+
Sbjct: 104 HY---ASLKLSPGLSSYADNPEGASVSVTKLVEFAKGRIPKGKLKKSDIRLMATAGMRLL 160
Query: 74 GDEKSEQILEAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTV 133
EQIL+ R ++ S S F+++ EW +V+ G+ EG WV N+ LG LGGD KT
Sbjct: 161 DVPVQEQILDVTRRVLRS-SGFKFQDEWATVISGTDEGIYAWVVANHALGSLGGDPLKTT 219
Query: 134 GVIDLGGGSVQMAYAISSDAAENAPPVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQAS 193
G+++LGG S Q+ + S E+ PP Y Y +Y HS+L +G A+
Sbjct: 220 GIVELGGASAQVTFVPS----EHVPPEFSRTISY------GNVSYTIYSHSFLDFGQDAA 269
Query: 194 RVEILKT 200
++L++
Sbjct: 270 EDKLLES 276
>AT1G14240.1 | chr1:4865159-4867777 FORWARD LENGTH=484
Length = 483
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 14/186 (7%)
Query: 14 HYWQQGSMVVKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLI 73
HY ++ + PGLSSYA P+ A+ S+ L+E AK +PK++ +R+ ++L ATAG+RL+
Sbjct: 103 HY---ANLKLTPGLSSYADNPEGASVSVTKLVEFAKQRIPKRMFRRSDIRLMATAGMRLL 159
Query: 74 GDEKSEQILEAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTV 133
EQILE R ++ S S F ++ EW +V+ GS EG W+ NY LG LG D +T
Sbjct: 160 EVPVQEQILEVTRRVLRS-SGFMFRDEWANVISGSDEGIYSWITANYALGSLGTDPLETT 218
Query: 134 GVIDLGGGSVQMAYAISSDAAENAPPVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQAS 193
G+++LGG S Q+ + ++E+ PP Y Y +Y HS+L YG A+
Sbjct: 219 GIVELGGASAQVTFV----SSEHVPP------EYSRTIAYGNISYTIYSHSFLDYGKDAA 268
Query: 194 RVEILK 199
++L+
Sbjct: 269 LKKLLE 274
>AT2G02970.1 | chr2:865395-868007 REVERSE LENGTH=556
Length = 555
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 105/175 (60%), Gaps = 13/175 (7%)
Query: 20 SMVVKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSE 79
S+ + PGLS++A P A+ S+ L+E AKG VPK + T ++L ATAG+RL+ E
Sbjct: 123 SLKLHPGLSAFADDPDGASVSLTELVEFAKGRVPKGMWIETEVRLMATAGMRLLELPVQE 182
Query: 80 QILEAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLG 139
+IL R ++ S S F ++ EW SV+ GS EG WV N+ LG LGGD KT G+++LG
Sbjct: 183 KILGVARRVLKS-SGFLFRDEWASVISGSDEGVYAWVVANFALGSLGGDPLKTTGIVELG 241
Query: 140 GGSVQMAYAISSDAAENAPPVPVGKDPYVTKEYLKGK-DYNLYVHSYLHYGLQAS 193
G S Q+ + +SS+ P+P P ++ G YNLY HS+LH+G A+
Sbjct: 242 GASAQVTF-VSSE------PMP----PEFSRTISFGNVTYNLYSHSFLHFGQNAA 285
>AT1G14230.1 | chr1:4861497-4863991 FORWARD LENGTH=504
Length = 503
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 20 SMVVKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSE 79
S+ + PGLS+YA P+ + S+ L+E AK V K K++ ++L ATAG+RL+ E
Sbjct: 117 SLKLSPGLSAYADNPEGVSESVTELVEFAKKRVHKGKLKKSDIRLMATAGMRLLELPVQE 176
Query: 80 QILEAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLG 139
QIL+ R ++ S S F ++ EW SV+ GS EG WV N+ LG LGG+ KT G+++LG
Sbjct: 177 QILDVTRRVLRS-SGFDFRDEWASVISGSDEGVYAWVVANHALGSLGGEPLKTTGIVELG 235
Query: 140 GGSVQMAYAISSDAAENAPPVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEI 197
G S Q+ + + E P + YNLY HS+L +G A++ ++
Sbjct: 236 GASAQVTFV----STELVP------SEFSRTLAYGNVSYNLYSHSFLDFGQDAAQEKL 283
>AT4G19180.1 | chr4:10485518-10487868 REVERSE LENGTH=741
Length = 740
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 21 MVVKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQ 80
M +PG +I PL++ A+ +PK + T L + ATAG+R + S
Sbjct: 196 METEPGFDKLVNNRTGLKTAIKPLIQWAEKQIPKNAHRTTSLFVYATAGVRRLRPADSSW 255
Query: 81 ILEAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSK-TVGVIDLG 139
IL V ++ +KS F + EW+ ++ G++E W ALNY LG K T G +DLG
Sbjct: 256 ILGNVWSIL-AKSPFTCRREWVKIISGTEEAYFGWTALNYQTSMLGALPKKATFGALDLG 314
Query: 140 GGSVQMAY 147
G S+Q+ +
Sbjct: 315 GSSLQVTF 322
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,790,480
Number of extensions: 319226
Number of successful extensions: 523
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 509
Number of HSP's successfully gapped: 7
Length of query: 390
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 290
Effective length of database: 8,364,969
Effective search space: 2425841010
Effective search space used: 2425841010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)