Os11g0414000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : eIF4-gamma/eIF5/eIF2-epsilon domain containing protein.
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Os11g0414000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : eIF4-gamma/eIF5/eIF2-epsilon domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.57 | 0.185 | 14.2 | 0.0688 | 0.614 | 0.27 | -0.114 | -0.339 | 0.172 | 3.96 | 20.76 | 593 | -- | -- |
| 15.94 | 0.186 | 14.2 | 0.137 | 0.61 | 0.286 | -0.047 | -- | 0.188 | 3.93 | 20.79 | 573 | -- | -- |
| 15.61 | 0.184 | 14.2 | 0.0715 | 0.612 | 0.273 | -- | -0.33 | 0.173 | 3.97 | 20.8 | 602 | -- | -- |
| 15.94 | 0.186 | 14.2 | 0.142 | 0.62 | 0.299 | -- | -- | 0.189 | 3.98 | 20.75 | 573 | -- | -- |
| 34.23 | 0.272 | 14.2 | 0.0398 | -- | 0.314 | -- | -0.394 | 0.146 | -- | 21.9 | 1100 | -- | -- |
| 18.73 | 0.203 | 14.2 | 0.247 | 0.601 | -- | -0.135 | -- | 0.258 | 3.7 | -- | -- | -- | -- |
| 18.79 | 0.203 | 14.2 | 0.25 | 0.6 | -- | -- | -- | 0.259 | 3.71 | -- | -- | -- | -- |
| 34.46 | 0.273 | 14.2 | 0.0414 | -- | 0.472 | -- | -- | 0.179 | -- | 19.2 | 2445 | -- | -- |
| 16.1 | 0.187 | 14.2 | -- | 0.604 | 0.426 | -- | -- | 0.171 | 3.81 | 19.5 | 2167 | -- | -- |
| 38.72 | 0.291 | 14.2 | 0.275 | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
| 20.43 | 0.211 | 14.2 | -- | 0.605 | -- | -- | -- | 0.231 | 3.71 | -- | -- | -- | -- |
| 34.48 | 0.273 | 14.2 | -- | -- | 0.504 | -- | -- | 0.168 | -- | 19.2 | 2457 | -- | -- |
| 40.7 | 0.298 | 14.2 | -- | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 6 |
| 4 | 14.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 10 |
| 15 | 14.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 2 |
| 20 | 14.91 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 26 | 14.94 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 11 |
| 32 | 14.98 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 11 |
| 40 | 15.00 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 6 |
| 45 | 15.02 | temperature | 20 | 720 | < th | dose independent | sin | 12 | NA |
| 58 | 15.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 83 | 15.13 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 2 |
| 127 | 15.21 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 142 | 15.25 | temperature | 20 | 720 | > th | dose independent | sin | 12 | NA |
| 154 | 15.26 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 232 | 15.40 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 19 |
| 383 | 15.59 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 463 | 15.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 640 | 15.82 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 652 | 15.83 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 697 | 15.86 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 731 | 15.88 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 756 | 15.90 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 780 | 15.94 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 16 |
| 788 | 15.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 794 | 15.95 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 795 | 15.95 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 23 |
| 797 | 15.95 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 817 | 15.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 839 | 15.98 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 23 |
| 856 | 15.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 874 | 16.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 884 | 16.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 887 | 16.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 915 | 16.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |