Os11g0302800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF724 family protein.
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Os11g0302800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF724 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 456.06 | 1 | 10.6 | -1.88 | 2.14 | -2.14 | 0.0617 | -2.47 | -1.67 | 22.2 | 70 | 1276 | -- | -- |
| 467.56 | 1.01 | 10.6 | -2.25 | 2.12 | -2.3 | 0.342 | -- | -1.64 | 22.2 | 70 | 1262 | -- | -- |
| 455.21 | 0.994 | 10.6 | -1.89 | 2.05 | -2.18 | -- | -2.5 | -1.67 | 22.2 | 70.03 | 1239 | -- | -- |
| 467.98 | 1.01 | 10.6 | -2.26 | 2.12 | -2.31 | -- | -- | -1.65 | 22.2 | 69.93 | 1262 | -- | -- |
| 590.16 | 1.13 | 10.5 | -1.88 | -- | -3.3 | -- | -2.29 | -1.69 | -- | 73 | 1019 | -- | -- |
| 660.85 | 1.21 | 10.6 | -1.72 | 2.47 | -- | 0.998 | -- | -1.46 | 22.8 | -- | -- | -- | -- |
| 664.91 | 1.21 | 10.6 | -1.76 | 2.46 | -- | -- | -- | -1.47 | 22.7 | -- | -- | -- | -- |
| 605.81 | 1.15 | 10.6 | -2.27 | -- | -3.48 | -- | -- | -1.76 | -- | 72.93 | 1001 | -- | -- |
| 599.73 | 1.14 | 10.6 | -- | 2.09 | -1.98 | -- | -- | -1.49 | 22.2 | 70.6 | 1235 | -- | -- |
| 1039.47 | 1.51 | 10.5 | -1.71 | -- | -- | -- | -- | -1.45 | -- | -- | -- | -- | -- |
| 746.68 | 1.28 | 10.5 | -- | 2.45 | -- | -- | -- | -1.27 | 22.7 | -- | -- | -- | -- |
| 727.21 | 1.26 | 10.5 | -- | -- | -3.72 | -- | -- | -1.56 | -- | 82.05 | 927 | -- | -- |
| 1116.88 | 1.56 | 10.4 | -- | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 399.28 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 410.74 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 8 | 412.34 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 12 | 413.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 19 | 413.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 20 | 413.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 33 | 415.15 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 45 | 416.12 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 9 |
| 57 | 416.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 9 |
| 103 | 419.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 117 | 420.12 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 143 | 420.85 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 144 | 420.86 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 14 |
| 303 | 425.00 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 366 | 426.82 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 459 | 431.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 485 | 432.52 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 488 | 432.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 534 | 434.62 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 589 | 437.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 598 | 437.67 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 631 | 439.19 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 723 | 442.58 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 782 | 445.07 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 804 | 445.84 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 832 | 446.91 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 854 | 447.64 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 856 | 447.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 883 | 448.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 896 | 448.92 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 898 | 448.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 903 | 449.13 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 919 | 449.64 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 920 | 449.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 926 | 449.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 927 | 449.84 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 940 | 450.13 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 955 | 450.62 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 968 | 450.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 969 | 450.92 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 970 | 450.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 8 |
| 980 | 451.06 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |