BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0302800 Os11g0302800|AK064557
(785 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62300.2 | chr3:23054247-23057081 FORWARD LENGTH=724 100 4e-21
AT2G47230.2 | chr2:19387126-19390011 FORWARD LENGTH=710 87 4e-17
AT2G47220.1 | chr2:19384059-19386472 FORWARD LENGTH=470 84 3e-16
AT1G26540.1 | chr1:9167783-9170795 REVERSE LENGTH=696 80 5e-15
AT5G23770.2 | chr5:8014513-8016755 REVERSE LENGTH=579 74 3e-13
AT1G11420.1 | chr1:3844581-3846872 REVERSE LENGTH=605 72 1e-12
AT5G23800.1 | chr5:8022216-8024689 REVERSE LENGTH=553 69 1e-11
AT5G23780.1 | chr5:8017291-8019026 REVERSE LENGTH=427 62 8e-10
AT2G46840.1 | chr2:19249191-19249909 REVERSE LENGTH=206 58 2e-08
AT1G03300.1 | chr1:811033-813086 REVERSE LENGTH=671 56 8e-08
>AT3G62300.2 | chr3:23054247-23057081 FORWARD LENGTH=724
Length = 723
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 21/244 (8%)
Query: 549 DTPISKYVARTHNSSCPLMQKFLHVHENIMVDQ-------PSESLAIIELPFVKTSPMWA 601
D P++ +V ++SS + + + N +V++ P + + LPFVK S +W
Sbjct: 493 DRPLASWVHTGNSSSGQSVSRTPDIGLNTVVEKHVDIVETPPGRESTMVLPFVKKSQLWK 552
Query: 602 QIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAESINMLNVHDDNAVFEH 661
+E+MEVF VPQ P+F L + E REG A+G M F++L E +N L V D +
Sbjct: 553 VLESMEVFKVVPQSPHFSPLLESEEECREGDAIGRMVMFSSLLEKVNNLQVDDPISSINR 612
Query: 662 KMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKKIAQEEIDDQQRCAEI 721
C LE GF+V RSR+ +LS+K + + +K E+KI E D+++R E
Sbjct: 613 IDECFLKLEKHGFNVTTPRSRIAKILSIKERQTCALEELKAVEEKIT--ENDNKRRKYEE 670
Query: 722 SVLSMVVRQLEQHAHLFRCIKNRAISQQMSHAMENSRLKVEASQLKQSSMSTEQRFSSVV 781
++ +L++ L + K ++ E +R++ +A+ L Q + + F +++
Sbjct: 671 DIV-----ELQRQEVLMKEAK-------VTLDNEIARMQSQAAVLDQEVQNVDHEFQAIL 718
Query: 782 AAPW 785
AAPW
Sbjct: 719 AAPW 722
>AT2G47230.2 | chr2:19387126-19390011 FORWARD LENGTH=710
Length = 709
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 31/271 (11%)
Query: 535 AELGNSLIVSNNTQDTPISKYVARTHNSSCPLMQKFLHVHENIMVD-------------- 580
AE+ ++ + N+ D P++ ++ ++ + ++ +D
Sbjct: 450 AEINDTSSICNDVDDQPLAAWINLPTDNFFFFFFFIVLIYPETSIDHSPIVVNNAAIATD 509
Query: 581 ----QPSESLAIIELPFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGL 636
Q +++L I LPF K SP W E EV PQ P+F L + E RE A+G+
Sbjct: 510 VEERQANDTLMI--LPFAKKSPFWKMYETQEVCKIAPQSPHFSPLFEAKEELREWTAVGM 567
Query: 637 MYSFTNLAESINMLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKI 696
M SF L E + L + + + LE GFDV +SR+ +LSL++ +K
Sbjct: 568 MVSFYGLLEEVKNLQLDVSPSTLGSLSCSFAELEKHGFDVAAPQSRINKMLSLQDERAKK 627
Query: 697 QDMMKRSEKKIAQEEIDDQQRCAEISVLSMVVRQLEQHAHLFRCIKNRAISQQMSHAME- 755
+ K EKKI EI+ E++ L + + +L+ + + ++++M A +
Sbjct: 628 AEERKGLEKKIEAGEIEGHTYEEEMAELELKILELK---------RQQVVAKEMKEATDK 678
Query: 756 -NSRLKVEASQLKQSSMSTEQRFSSVVAAPW 785
S +K A + Q F S +APW
Sbjct: 679 VTSGMKSYAEMINQEIEDLRLEFQSTASAPW 709
>AT2G47220.1 | chr2:19384059-19386472 FORWARD LENGTH=470
Length = 469
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%)
Query: 587 AIIELPFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAES 646
A + LPFVK SP+W E+MEVF +VPQ P+F L + +FREG ALG+M +F+ + E
Sbjct: 282 ATMVLPFVKKSPVWKIYESMEVFKRVPQSPHFSPLFEAKEDFREGFALGMMVTFSGVLEK 341
Query: 647 INMLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKK 706
+ L + LE GF V SR+ LL+LK+ KI + +K +K+
Sbjct: 342 VEDLKTDVPIRQLNSLKDSFTELEKHGFTVTAPLSRIAKLLALKDRQLKILEELKVFDKE 401
Query: 707 IAQE 710
+ E
Sbjct: 402 MKDE 405
>AT1G26540.1 | chr1:9167783-9170795 REVERSE LENGTH=696
Length = 695
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 592 PFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAESINMLN 651
PF K P W E + + VPQ P+F L + + RE A+G+M SF L E + L
Sbjct: 509 PFTKNLPFWKTYEMEKGYKTVPQNPHFSPLLEFKEDIREWSAVGMMVSFYGLLEEVKKLQ 568
Query: 652 VHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKKIAQEE 711
+ ++ C + LE GFD+ +SR+ +LSL+ +K + K EK+I EE
Sbjct: 569 LDVSSSKLGSLSTCFAELEKHGFDIATPQSRINKVLSLQVGRAKKVEERKCLEKRIEAEE 628
Query: 712 IDDQQRCAEISVLSMVVRQLEQHAHLFRCIKNRAISQQMSHAMENSRLKVEASQLKQSSM 771
I+ Q+ E+ + + +L++ A + + K A +M M++S A + Q
Sbjct: 629 IEMQKFEHEMVEVERKMLELKRRAEVAKEKKEAA--DKMIVEMKSS-----AETIDQEIA 681
Query: 772 STEQRFSSVVAAPW 785
+ E F + V APW
Sbjct: 682 NVELEFITSVLAPW 695
>AT5G23770.2 | chr5:8014513-8016755 REVERSE LENGTH=579
Length = 578
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 580 DQPSESLAIIELPFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPE-FREGIALGLMY 638
D+P ++ + LPF K +W +E+MEVF VPQ P+F L E RE A+G+M
Sbjct: 395 DKPKDTTMV--LPFEKKLRIWETLESMEVFKTVPQSPHFSPLLVESREDSREMSAVGMML 452
Query: 639 SFTNLAESINMLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQD 698
+F L + + L +D + F + LE GF+V+ +SR+ LLSL++ SK +
Sbjct: 453 TFFGLLDEVKALQHNDPISFFISLTNSFAELEKHGFNVKAPQSRINKLLSLRDRQSKKTE 512
Query: 699 MMKRSEKKIAQEE 711
+K +EK A++E
Sbjct: 513 ELKDAEKVTAEKE 525
>AT1G11420.1 | chr1:3844581-3846872 REVERSE LENGTH=605
Length = 604
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 587 AIIELPFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAES 646
I+ LPF K SP+W E++EVF V +F L + +FREG A+G+M ++ L E
Sbjct: 402 TIMVLPFAKKSPVWKTYESLEVFKSVSHSLHFSPLFETKQDFREGYAIGMMVTYFGLLEK 461
Query: 647 INMLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKK 706
L + S LE GF+V SR++ LL+LK+ I + +K +K+
Sbjct: 462 FKDLEADVPVSQLNSLKDSFSELEKHGFNVTTPLSRIDKLLALKDRQLYIMEELKGFDKE 521
Query: 707 I------AQEEIDD-QQRCAEISVLSMVVRQLEQHAHLFRCIKNRAISQQMSHAMENSRL 759
+ A++E DD +Q+ E+ + +L++ + K Q+ + + ++
Sbjct: 522 MTNEFSKAKQEFDDMEQKILEV---KHKIIELQRQEAALKEQKEAEKEQKDAAWKKICQM 578
Query: 760 KVEASQLKQSSMSTEQRFSSVVAAPW 785
+ A L E F ++++APW
Sbjct: 579 ESCAKDLNVELEDVEFEFETILSAPW 604
>AT5G23800.1 | chr5:8022216-8024689 REVERSE LENGTH=553
Length = 552
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 593 FVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAESINMLNV 652
F K P+W +E+MEVF +PQ P+F L + + RE +A+G+M +F+ L E + L
Sbjct: 373 FEKKLPVWKILESMEVFKTIPQSPHFRPLAEIREDSREMLAVGMMLTFSCLLEQVKALQH 432
Query: 653 HDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKKIAQEE- 711
+ + F + LE GF+ + + R+ LL+L+ S+ D +K ++K A++E
Sbjct: 433 DEARSSFISLSNSFAELEKHGFNAQVAQLRINKLLTLRGMQSRKMDELKGAKKVTAEKES 492
Query: 712 --IDDQQRCAEISVLS 725
++++++ E+ L+
Sbjct: 493 VKVENERKILELQRLN 508
>AT5G23780.1 | chr5:8017291-8019026 REVERSE LENGTH=427
Length = 426
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 591 LPFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAESINML 650
LPF K +W +E++E VPQ P+F L + + RE A+G+M +F L E + L
Sbjct: 256 LPFEKKLSIWKTLESVET---VPQSPHFSPLVETREDCREMSAVGMMLTFPCLLEEVKSL 312
Query: 651 NVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKKIAQE 710
+ + LE GF+V+ +SR+ LLSL+ S D +K +EK A++
Sbjct: 313 QHDNSISSLISLSNNFCELEKHGFNVKAPQSRISKLLSLRGKQSMKMDELKGAEKVTAEK 372
Query: 711 E---IDDQQRCAEISVLSMVVRQLEQHAHLFRCIKNRAISQQMSHAMENSRLKVEASQLK 767
E I+++++ E+ L N + ++++ + K A+++
Sbjct: 373 ESIKIENERKILELQRL------------------NEEVDKEIAQS------KSCAAKIV 408
Query: 768 QSSMSTEQRFSSVVAAPW 785
Q E +F + +APW
Sbjct: 409 QQLEDVELQFQTTASAPW 426
>AT2G46840.1 | chr2:19249191-19249909 REVERSE LENGTH=206
Length = 205
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 589 IELPFVKTSPMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAESIN 648
I LPF KT W + E+ EV+ + PQRP+F L P F E A L +F + ++++
Sbjct: 62 IVLPFTKTLASWKEFESDEVYKRTPQRPHFPSLAYTHPSFGEPTAAYLTAAFIDCVKTVD 121
Query: 649 MLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKKIA 708
+ + + + E GFDV S++ TLL L+ K++ R +K +
Sbjct: 122 GMCEDTPKSELDVYRETFKMFEEQGFDVAEPLSQVLTLLVLR----KMRRESLRQQKGME 177
Query: 709 QEEIDDQQR 717
+E DD +
Sbjct: 178 KEMADDYSK 186
>AT1G03300.1 | chr1:811033-813086 REVERSE LENGTH=671
Length = 670
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 32/257 (12%)
Query: 538 GNSLIVSNNTQDTPISKYVARTHNSSCPLMQKFLHVHENIMVDQPSESLAIIELPFVKTS 597
G S+ +++ D P+S + + S ++ F E + P++S I PF K
Sbjct: 437 GKSICNNDDVDDQPLSTELP--YYQSLSVVNSFAADAE----ETPAKSARTIS-PFAKKL 489
Query: 598 PMWAQIEAMEVFSKVPQRPNFHQLQQHPPEFREGIALGLMYSFTNLAESINMLNVHDDNA 657
P W E E++ +PQ P+F L + + RE A+G+M +F L + + L + D ++
Sbjct: 490 PFWKSYETDELYKSLPQSPHFSPLFKAKEDIREWSAVGMMVTFYCLLKEVKDLQLDDSSS 549
Query: 658 VFEHKMRCISVLEADGFDVRHLRSRLETLLSLKNSWSKIQDMMKRSEKKIAQEEIDDQQR 717
++ LE GF+V SR+ +L L++ KR++K ++++
Sbjct: 550 KLSSLSSSLAELEKHGFNVTDPLSRISKVLPLQD---------KRAKKA-------EERK 593
Query: 718 CAEISVLSMVV---RQLEQHAHLFRCI---KNRAISQQMSHAMENSR---LKVEASQLKQ 768
C E + + R E+ A R I K +A+ + + R +K A + Q
Sbjct: 594 CLEKKIECEEIERKRFEEEFADFERIIIEKKRQALVAKEKKEAADKRIGEMKTCAETIDQ 653
Query: 769 SSMSTEQRFSSVVAAPW 785
E F + V+ PW
Sbjct: 654 EIKDEELEFQTTVSTPW 670
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,371,406
Number of extensions: 692616
Number of successful extensions: 1707
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 1701
Number of HSP's successfully gapped: 10
Length of query: 785
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 679
Effective length of database: 8,200,473
Effective search space: 5568121167
Effective search space used: 5568121167
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)