Os11g0302500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0302500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.08 | 0.37 | 8.27 | -0.664 | 1.21 | 0.815 | 0.148 | -0.282 | -0.353 | 10.6 | 15.98 | 1361 | -- | -- |
| 62.24 | 0.367 | 8.27 | -0.652 | 1.22 | 0.81 | 0.178 | -- | -0.351 | 10.6 | 15.97 | 1358 | -- | -- |
| 62.16 | 0.367 | 8.27 | -0.664 | 1.21 | 0.815 | -- | -0.323 | -0.355 | 10.6 | 15.97 | 1359 | -- | -- |
| 62.37 | 0.368 | 8.27 | -0.633 | 1.21 | 0.809 | -- | -- | -0.34 | 10.6 | 15.97 | 1359 | -- | -- |
| 87.48 | 0.438 | 8.26 | -0.47 | -- | 0.791 | -- | -0.0616 | -0.187 | -- | 3.125 | 1610 | -- | -- |
| 85.27 | 0.433 | 8.22 | -0.472 | 1.09 | -- | 0.0285 | -- | -0.131 | 10.4 | -- | -- | -- | -- |
| 85.28 | 0.432 | 8.22 | -0.47 | 1.09 | -- | -- | -- | -0.131 | 10.4 | -- | -- | -- | -- |
| 87.5 | 0.438 | 8.26 | -0.47 | -- | 0.791 | -- | -- | -0.187 | -- | 3.125 | 1610 | -- | -- |
| 70.24 | 0.39 | 8.26 | -- | 1.22 | 0.803 | -- | -- | -0.253 | 10.7 | 19.99 | 1348 | -- | -- |
| 157.54 | 0.586 | 8.25 | -0.489 | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
| 91.11 | 0.446 | 8.21 | -- | 1.09 | -- | -- | -- | -0.0785 | 10.5 | -- | -- | -- | -- |
| 93.33 | 0.451 | 8.25 | -- | -- | 0.793 | -- | -- | -0.135 | -- | 3.125 | 1610 | -- | -- |
| 163.84 | 0.597 | 8.24 | -- | -- | -- | -- | -- | -0.0807 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.28 | radiation | 20 | 270 | < th | dose dependent | rect. | 10 | 17 |
| 20 | 62.55 | radiation | 10 | 270 | < th | dose independent | rect. | 11 | 16 |
| 30 | 62.90 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 34 | 63.01 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 48 | 63.50 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 52 | 63.58 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 55 | 63.65 | radiation | 20 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 93 | 63.97 | radiation | 30 | 1440 | < th | dose dependent | rect. | 1 | 15 |
| 104 | 64.00 | radiation | 10 | 10 | < th | dose dependent | sin | 11 | NA |
| 108 | 64.03 | radiation | 20 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 109 | 64.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 138 | 64.13 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 148 | 64.16 | radiation | 20 | 1440 | > th | dose independent | sin | 2 | NA |
| 174 | 64.19 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 8 |
| 194 | 64.21 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 197 | 64.22 | radiation | 30 | 1440 | < th | dose dependent | sin | 0 | NA |
| 198 | 64.23 | radiation | 20 | 1440 | < th | dose independent | sin | 1 | NA |
| 200 | 64.23 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 222 | 64.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 15 |
| 274 | 64.32 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 283 | 64.34 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 400 | 64.51 | radiation | 20 | 1440 | > th | dose independent | no | NA | NA |
| 596 | 64.62 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 627 | 64.65 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 650 | 64.67 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 651 | 64.67 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 912 | 64.90 | radiation | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 931 | 64.90 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 976 | 64.94 | radiation | 1 | 1440 | > th | dose dependent | sin | 23 | NA |