Os11g0297000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0297000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.93 | 0.351 | 7.52 | 1.96 | 1.48 | -0.201 | -0.911 | -2.41 | 0.799 | 20.8 | 1.2 | 47520 | -- | -- |
| 63.77 | 0.372 | 7.45 | 1.86 | 1.48 | 0.209 | -0.853 | -- | 0.842 | 20.8 | 5.4 | 47520 | -- | -- |
| 58.7 | 0.357 | 7.51 | 1.99 | 1.48 | -0.213 | -- | -2.31 | 0.815 | 20.9 | 1.2 | 47520 | -- | -- |
| 66.2 | 0.379 | 7.45 | 1.89 | 1.48 | 0.198 | -- | -- | 0.844 | 20.9 | 5.308 | 47520 | -- | -- |
| 182.76 | 0.63 | 7.46 | 2.21 | -- | -0.716 | -- | -2.23 | 0.858 | -- | 1.397 | 47520 | -- | -- |
| 64.12 | 0.375 | 7.44 | 1.99 | 1.48 | -- | -0.847 | -- | 0.881 | 20.8 | -- | -- | -- | -- |
| 66.51 | 0.382 | 7.44 | 2.02 | 1.48 | -- | -- | -- | 0.881 | 20.9 | -- | -- | -- | -- |
| 187.37 | 0.638 | 7.36 | 2.54 | -- | -1.06 | -- | -- | 1.05 | -- | 1.1 | 47520 | -- | -- |
| 100.92 | 0.468 | 7.54 | -- | 1.48 | 1.84 | -- | -- | 0.404 | 20.9 | 20.1 | 47520 | -- | -- |
| 192.4 | 0.648 | 7.4 | 2.02 | -- | -- | -- | -- | 0.87 | -- | -- | -- | -- | -- |
| 173.84 | 0.617 | 7.49 | -- | 1.48 | -- | -- | -- | 0.656 | 21 | -- | -- | -- | -- |
| 226.07 | 0.7 | 7.5 | -- | -- | 1.85 | -- | -- | 0.392 | -- | 19.57 | 47520 | -- | -- |
| 299.83 | 0.808 | 7.45 | -- | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.49 | wind | 1 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 2 | 54.60 | wind | 1 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 5 | 54.78 | wind | 1 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 6 | 54.80 | wind | 1 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 8 | 54.87 | wind | 1 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 19 | 55.15 | wind | 1 | 4320 | < th | dose dependent | rect. | 3 | 6 |
| 34 | 55.48 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 45 | 55.78 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 47 | 55.83 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 48 | 55.86 | wind | 1 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 56 | 55.98 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 73 | 56.20 | humidity | 90 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 78 | 56.24 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 81 | 56.28 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 83 | 56.31 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 90 | 56.36 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 91 | 56.37 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 93 | 56.39 | wind | 1 | 43200 | < th | dose independent | sin | 3 | NA |
| 109 | 56.46 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 110 | 56.46 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 113 | 56.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 117 | 56.49 | wind | 1 | 43200 | > th | dose independent | sin | 3 | NA |
| 143 | 56.54 | wind | 1 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 144 | 56.54 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 152 | 56.56 | wind | 1 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 157 | 56.57 | wind | 1 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 166 | 56.58 | humidity | 80 | 720 | < th | dose dependent | rect. | 20 | 11 |
| 185 | 56.63 | wind | 1 | 43200 | < th | dose dependent | sin | 2 | NA |
| 189 | 56.64 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 19 |
| 203 | 56.66 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 206 | 56.67 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 214 | 56.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 14 |
| 235 | 56.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 236 | 56.71 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 17 |
| 261 | 56.74 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 272 | 56.75 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 21 |
| 308 | 56.79 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 371 | 56.85 | wind | 1 | 4320 | < th | dose dependent | rect. | 2 | 13 |
| 372 | 56.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 20 |
| 373 | 56.86 | wind | 1 | 43200 | < th | dose independent | no | NA | NA |
| 381 | 56.86 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 18 |
| 387 | 56.88 | wind | 1 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 402 | 56.90 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 412 | 56.91 | wind | 1 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 417 | 56.91 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 422 | 56.92 | wind | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 432 | 56.92 | wind | 1 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 468 | 56.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 483 | 56.99 | wind | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 489 | 56.99 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 491 | 56.99 | wind | 7 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 528 | 57.02 | wind | 1 | 4320 | > th | dose independent | sin | 7 | NA |
| 576 | 57.05 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 604 | 57.08 | wind | 1 | 43200 | > th | dose independent | no | NA | NA |
| 621 | 57.09 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 638 | 57.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 651 | 57.12 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 663 | 57.12 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 664 | 57.12 | wind | 1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 679 | 57.13 | radiation | 10 | 30 | > th | dose dependent | rect. | 6 | 2 |
| 692 | 57.13 | humidity | 90 | 720 | < th | dose dependent | rect. | 19 | 13 |
| 696 | 57.14 | wind | 1 | 4320 | < th | dose independent | sin | 7 | NA |
| 717 | 57.16 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 743 | 57.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 21 |
| 754 | 57.18 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 790 | 57.20 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 793 | 57.21 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 13 |
| 814 | 57.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 6 |
| 828 | 57.23 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 861 | 57.26 | wind | 1 | 4320 | < th | dose independent | rect. | 1 | 14 |
| 912 | 57.30 | wind | 1 | 4320 | > th | dose independent | rect. | 1 | 15 |
| 997 | 57.34 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 22 |