Os11g0293300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Survival motor neuron interacting protein 1 family protein.
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Os11g0293300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Survival motor neuron interacting protein 1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.36 | 0.532 | 6.88 | 2.33 | 2.67 | 2.29 | 1.14 | 0.255 | 1.35 | 18.2 | 19.22 | 42 | 22 | -- |
| 128.09 | 0.527 | 6.89 | 2.28 | 2.71 | 2.38 | 1.01 | -- | 1.36 | 18.4 | 18.32 | 45 | 21.7 | -- |
| 130.87 | 0.533 | 6.88 | 2.28 | 2.69 | 2.39 | -- | -0.0543 | 1.36 | 18.5 | 18.2 | 45 | 21.5 | -- |
| 130.87 | 0.533 | 6.88 | 2.28 | 2.69 | 2.4 | -- | -- | 1.36 | 18.5 | 18.18 | 45 | 21.5 | -- |
| 175.4 | 0.617 | 6.79 | 2.5 | -- | 2.54 | -- | 0.78 | 1.55 | -- | -9.394 | 396 | 17.3 | -- |
| 179.73 | 0.628 | 6.79 | 2.61 | 2.22 | -- | 1.19 | -- | 1.62 | 16.3 | -- | -- | -- | -- |
| 183.63 | 0.635 | 6.79 | 2.62 | 2.22 | -- | -- | -- | 1.63 | 16.3 | -- | -- | -- | -- |
| 172.4 | 0.612 | 6.76 | 2.4 | -- | 2.55 | -- | -- | 1.56 | -- | -32.22 | 839 | 20.9 | -- |
| 257.74 | 0.748 | 6.99 | -- | 3.55 | 3.84 | -- | -- | 1.01 | 19.4 | 15.54 | 60 | 21.6 | -- |
| 449.85 | 0.991 | 6.77 | 2.53 | -- | -- | -- | -- | 1.57 | -- | -- | -- | -- | -- |
| 364.57 | 0.893 | 6.85 | -- | 2.18 | -- | -- | -- | 1.33 | 16.4 | -- | -- | -- | -- |
| 271.38 | 0.767 | 6.9 | -- | -- | 3.99 | -- | -- | 1.05 | -- | -88.73 | 4049 | 23.6 | -- |
| 618.97 | 1.16 | 6.84 | -- | -- | -- | -- | -- | 1.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.83 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 13 | 126.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 26 | 129.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 22 |
| 27 | 129.23 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 32 | 129.46 | temperature | 20.0 | 30 | > th | dose dependent | sin | 4 | NA |
| 33 | 129.50 | temperature | 10.0 | 30 | > th | dose dependent | sin | 3 | NA |
| 48 | 130.11 | temperature | 30.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 66 | 131.09 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 94 | 131.98 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 98 | 132.23 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 102 | 132.38 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 115 | 133.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 152 | 134.19 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 214 | 135.73 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 257 | 136.80 | temperature | 25.0 | 10 | > th | dose independent | rect. | 7 | 7 |
| 260 | 136.86 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 261 | 136.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 282 | 137.43 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 24 | 12 |
| 285 | 137.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 305 | 137.84 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 16 |
| 364 | 138.80 | temperature | 25.0 | 10 | > th | dose independent | rect. | 7 | 5 |
| 410 | 139.47 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 429 | 139.77 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 460 | 140.24 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 484 | 140.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 555 | 141.34 | temperature | 25.0 | 90 | > th | dose independent | sin | 3 | NA |
| 571 | 141.47 | temperature | 25.0 | 90 | < th | dose independent | sin | 3 | NA |
| 663 | 142.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 738 | 143.18 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 12 |
| 770 | 143.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 773 | 143.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 778 | 143.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 784 | 143.53 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 14 |
| 877 | 144.15 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 888 | 144.20 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 904 | 144.32 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |