Os11g0282300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1685 family protein.
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Os11g0282300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1685 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.38 | 0.4 | 12.9 | -0.829 | 0.43 | -1.36 | 0.472 | 0.861 | -0.0561 | 9.21 | 0.001368 | 75 | -- | -- |
| 73.9 | 0.4 | 12.9 | -0.775 | 0.501 | -1.27 | -0.501 | -- | -0.061 | 9.97 | 0.04995 | 74 | -- | -- |
| 72.87 | 0.398 | 12.9 | -0.797 | 0.398 | -1.37 | -- | 0.699 | -0.068 | 9.31 | 6.424e-05 | 74 | -- | -- |
| 74.72 | 0.403 | 12.9 | -0.781 | 0.458 | -1.34 | -- | -- | -0.0499 | 9.29 | 0.04999 | 74 | -- | -- |
| 78.8 | 0.413 | 13 | -0.784 | -- | -1.54 | -- | 0.624 | -0.0802 | -- | 0.1702 | 71 | -- | -- |
| 102.28 | 0.474 | 12.9 | -0.639 | 1.9 | -- | -0.611 | -- | 0.0414 | 11.7 | -- | -- | -- | -- |
| 103.9 | 0.477 | 12.9 | -0.663 | 1.91 | -- | -- | -- | 0.0388 | 11.7 | -- | -- | -- | -- |
| 81.11 | 0.419 | 13 | -0.819 | -- | -1.57 | -- | -- | -0.0922 | -- | 0.04 | 70 | -- | -- |
| 90.76 | 0.444 | 12.9 | -- | 0.453 | -1.32 | -- | -- | 0.00333 | 9.65 | 0.1778 | 72 | -- | -- |
| 332.42 | 0.852 | 12.9 | -0.718 | -- | -- | -- | -- | 0.0156 | -- | -- | -- | -- | -- |
| 115.5 | 0.503 | 12.9 | -- | 1.91 | -- | -- | -- | 0.113 | 11.7 | -- | -- | -- | -- |
| 96.09 | 0.457 | 12.9 | -- | -- | -1.55 | -- | -- | 0.0348 | -- | 0.171 | 60 | -- | -- |
| 346.02 | 0.868 | 12.9 | -- | -- | -- | -- | -- | 0.0952 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.57 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 3 | 72.18 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 4 | 73.47 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 21 |
| 8 | 74.27 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 9 | 74.29 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 11 | 74.30 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 16 | 74.39 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 19 |
| 19 | 74.48 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 13 |
| 31 | 74.74 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 48 | 75.11 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 49 | 75.19 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 53 | 75.31 | radiation | 1.0 | 10 | < th | dose independent | rect. | 19 | 21 |
| 57 | 75.34 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 68 | 75.49 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 15 |
| 70 | 75.50 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 78 | 75.58 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 91 | 75.75 | radiation | 1.0 | 10 | < th | dose independent | rect. | 19 | 11 |
| 103 | 76.03 | radiation | 1.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 105 | 76.03 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 108 | 76.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 14 |
| 109 | 76.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 111 | 76.10 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 136 | 76.49 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 137 | 76.49 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 138 | 76.49 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 140 | 76.49 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 146 | 76.49 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 148 | 76.49 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 151 | 76.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 175 | 76.79 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 177 | 76.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 182 | 76.83 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 189 | 77.00 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 192 | 77.03 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 15 |
| 194 | 77.05 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 10 |
| 195 | 77.05 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 197 | 77.06 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 228 | 77.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 252 | 77.51 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 271 | 77.84 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 361 | 78.95 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 368 | 79.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 413 | 79.63 | radiation | 1.0 | 90 | < th | dose independent | no | NA | NA |
| 415 | 79.64 | radiation | 1.0 | 90 | > th | dose independent | no | NA | NA |
| 416 | 79.64 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 461 | 79.66 | radiation | 1.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 535 | 80.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 541 | 80.37 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 572 | 80.91 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 581 | 81.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 588 | 81.25 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 591 | 81.32 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 10 |
| 716 | 81.93 | radiation | 1.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 751 | 82.08 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 785 | 82.28 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 794 | 82.39 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 835 | 82.65 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 853 | 82.85 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 854 | 82.87 | radiation | 20.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 950 | 83.03 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 10 | 19 |
| 955 | 83.07 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 960 | 83.13 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 13 |
| 990 | 83.34 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 992 | 83.35 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 10 |