Os11g0270000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0270000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 190.02 | 0.648 | 2.93 | 0.0173 | 0.102 | -9.22 | -0.482 | 31.4 | 0.089 | 6.24 | 0.7936 | 8 | -- | -- |
| 201.82 | 0.667 | 2.9 | 0.0546 | 0.136 | 0.199 | -0.762 | -- | 0.0624 | 5.16 | 0.7936 | 8 | -- | -- |
| 189.63 | 0.641 | 2.92 | 0.0191 | 0.122 | -9.56 | -- | 33.2 | 0.0939 | 8.54 | 6.1 | 5 | -- | -- |
| 202.53 | 0.663 | 2.9 | 0.0492 | 0.163 | -0.437 | -- | -- | 0.0738 | 7.45 | 2.086 | 61 | -- | -- |
| 190.45 | 0.643 | 2.93 | 0.0196 | -- | -9.67 | -- | 33.6 | 0.0955 | -- | 7.466 | 5 | -- | -- |
| 201.86 | 0.666 | 2.9 | 0.0524 | 0.134 | -- | -0.774 | -- | 0.0628 | 5.14 | -- | -- | -- | -- |
| 202.92 | 0.667 | 2.9 | 0.0547 | 0.158 | -- | -- | -- | 0.0671 | 7.33 | -- | -- | -- | -- |
| 203.95 | 0.665 | 2.9 | 0.0464 | -- | -0.383 | -- | -- | 0.0726 | -- | 2.774 | 61 | -- | -- |
| 202.54 | 0.663 | 2.9 | -- | 0.165 | -0.509 | -- | -- | 0.0672 | 7.34 | 2.437 | 73 | -- | -- |
| 204.25 | 0.668 | 2.9 | 0.0574 | -- | -- | -- | -- | 0.0697 | -- | -- | -- | -- | -- |
| 202.99 | 0.666 | 2.9 | -- | 0.159 | -- | -- | -- | 0.061 | 7.3 | -- | -- | -- | -- |
| 204.01 | 0.665 | 2.9 | -- | -- | -0.401 | -- | -- | 0.067 | -- | 3.117 | 61 | -- | -- |
| 204.33 | 0.667 | 2.9 | -- | -- | -- | -- | -- | 0.0633 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.27 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 5 | 175.29 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 9 | 177.02 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 5 |
| 29 | 177.03 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 49 | 177.04 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 3 |
| 53 | 177.04 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 69 | 181.14 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 70 | 181.39 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 80 | 181.52 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 81 | 181.52 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 82 | 181.62 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 83 | 181.66 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 87 | 181.66 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 98 | 182.00 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 99 | 182.01 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 142 | 188.35 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 145 | 188.70 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 20 |
| 147 | 188.71 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 20 |
| 182 | 189.46 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 191 | 189.50 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 192 | 189.56 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 7 | 16 |
| 193 | 189.58 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 196 | 189.76 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 198 | 189.78 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 7 | 14 |
| 205 | 189.86 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 215 | 189.96 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 216 | 189.96 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 226 | 189.97 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 10 |
| 236 | 189.97 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 238 | 189.98 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 8 |
| 324 | 190.14 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 23 |
| 327 | 190.18 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 13 |
| 347 | 190.20 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 348 | 190.20 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 399 | 190.20 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 405 | 190.31 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 407 | 190.33 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 408 | 190.35 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 409 | 190.35 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 13 |
| 495 | 190.52 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 504 | 190.64 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 513 | 190.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 11 |
| 516 | 190.72 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 528 | 190.91 | temperature | 20.0 | 4320 | > th | dose independent | sin | 22 | NA |
| 529 | 190.92 | temperature | 20.0 | 4320 | < th | dose independent | sin | 22 | NA |
| 533 | 190.93 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 542 | 191.03 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 543 | 191.03 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 544 | 191.07 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 553 | 191.14 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 7 | 15 |
| 594 | 191.25 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 732 | 191.62 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 10 |
| 756 | 191.71 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 760 | 191.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 762 | 191.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 3 |
| 763 | 191.73 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 10 | 6 |
| 789 | 191.85 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 798 | 191.90 | wind | 3.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 846 | 192.02 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 16 |
| 857 | 192.05 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 5 |
| 860 | 192.05 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 861 | 192.05 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 864 | 192.05 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 867 | 192.06 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 3 |
| 879 | 192.07 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 4 |
| 891 | 192.09 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 900 | 192.11 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 903 | 192.12 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 905 | 192.12 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 21 |
| 909 | 192.13 | wind | 3.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 931 | 192.20 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 935 | 192.20 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 963 | 192.29 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 967 | 192.29 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 1 | 4 |
| 984 | 192.33 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 2 | 2 |