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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0269700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.13 (0.0149) R2 : 0.0111
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.071 (0.0313) R2dN8 : 0.0144 R2N8 : 0.0111
σ : 0.28
deviance : 35.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.24 0.275 3.13 0.11 0.107 -0.0759 0.0178 -0.715 -0.0691 9.46 71.97 6338 -- --
34.9 0.275 3.14 0.0806 0.111 -0.173 -0.000832 -- -0.136 9.38 83.01 6494 -- --
34.14 0.272 3.14 0.153 0.107 -0.0966 -- -0.784 -0.0764 9.07 77 6257 -- --
34.89 0.275 3.14 0.0754 0.118 -0.167 -- -- -0.135 9.43 83.08 6597 -- --
34.75 0.275 3.14 0.155 -- -0.104 -- -0.793 -0.0815 -- 78.05 5948 -- --
35.31 0.279 3.13 0.0543 0.0997 -- -0.0412 -- -0.0655 9.28 -- -- -- --
35.31 0.278 3.13 0.0531 0.0995 -- -- -- -0.0655 9.45 -- -- -- --
35.48 0.277 3.14 0.0752 -- -0.156 -- -- -0.126 -- 81 7286 -- --
35.03 0.276 3.14 -- 0.113 -0.157 -- -- -0.137 9.36 83.01 6596 -- --
35.9 0.28 3.13 0.0524 -- -- -- -- -0.0651 -- -- -- -- --
35.39 0.278 3.13 -- 0.0995 -- -- -- -0.0714 9.41 -- -- -- --
35.62 0.278 3.15 -- -- -0.143 -- -- -0.142 -- 83.49 5848 -- --
35.97 0.28 3.13 -- -- -- -- -- -0.071 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.62 wind 7.0 10 > th dose dependent rect. 12 1
3 30.78 wind 7.0 10 > th dose independent rect. 12 1
5 32.18 wind 9.0 270 > th dose dependent rect. 9 1
17 32.75 radiation 10.0 30 > th dose independent rect. 17 14
22 32.85 radiation 10.0 30 > th dose dependent rect. 17 14
23 32.94 temperature 25.0 90 < th dose independent rect. 6 1
24 33.18 wind 9.0 270 > th dose independent rect. 9 1
36 33.39 radiation 10.0 30 > th dose independent rect. 6 2
50 33.51 radiation 10.0 30 > th dose independent sin 11 NA
51 33.54 radiation 10.0 30 < th dose independent sin 10 NA
57 33.60 humidity 70.0 1440 < th dose independent rect. 10 1
58 33.60 temperature 25.0 720 > th dose dependent rect. 23 10
59 33.64 humidity 70.0 1440 > th dose independent rect. 10 1
64 33.69 temperature 30.0 10 < th dose dependent rect. 6 2
95 33.70 radiation 10.0 10 > th dose dependent rect. 6 1
109 33.70 temperature 25.0 720 > th dose dependent rect. 24 8
122 33.71 atmosphere 1000.0 720 > th dose independent rect. 3 8
130 33.75 wind 7.0 720 < th dose independent rect. 23 7
131 33.76 precipitation 0.1 720 < th dose independent rect. 23 16
133 33.76 precipitation 0.1 720 < th dose dependent rect. 23 16
134 33.78 radiation 10.0 30 > th dose independent rect. 17 17
135 33.78 atmosphere 1000.0 30 > th dose independent rect. 23 23
136 33.78 wind 9.0 720 < th dose dependent rect. 23 6
142 33.82 atmosphere 995.0 720 > th dose independent rect. 23 16
144 33.83 precipitation 0.1 720 < th dose independent rect. 3 8
146 33.83 precipitation 0.1 720 < th dose dependent rect. 3 8
150 33.85 radiation 10.0 720 > th dose independent rect. 7 2
152 33.86 precipitation 0.1 720 < th dose independent rect. 15 8
155 33.86 precipitation 0.1 720 < th dose dependent rect. 15 8
164 33.90 temperature 25.0 720 < th dose independent rect. 1 8
165 33.90 atmosphere 1010.0 10 < th dose independent rect. 3 12
168 33.92 temperature 25.0 720 < th dose independent rect. 2 6
171 33.92 wind 7.0 720 < th dose independent rect. 2 9
174 33.92 radiation 1.0 90 < th dose dependent rect. 6 7
177 33.93 radiation 10.0 720 > th dose independent rect. 17 16
178 33.93 temperature 20.0 90 < th dose dependent rect. 6 1
190 33.95 radiation 10.0 30 < th dose independent rect. 23 11
196 33.96 wind 7.0 14400 < th dose independent rect. 9 1
197 33.96 temperature 25.0 720 > th dose independent rect. 24 9
198 33.96 atmosphere 1010.0 10 < th dose independent rect. 23 23
201 33.97 atmosphere 1010.0 10 < th dose independent sin 6 NA
204 33.97 atmosphere 1010.0 10 < th dose independent rect. 3 14
212 33.99 radiation 30.0 720 < th dose dependent rect. 1 8
214 33.99 wind 9.0 720 < th dose dependent rect. 23 12
219 34.00 atmosphere 1010.0 10 < th dose independent rect. 23 8
220 34.00 radiation 10.0 30 < th dose independent rect. 18 16
225 34.00 temperature 10.0 30 > th dose dependent rect. 23 7
228 34.01 temperature 15.0 1440 > th dose independent rect. 23 1
230 34.01 humidity 50.0 30 > th dose independent rect. 23 23
231 34.01 radiation 1.0 90 < th dose dependent rect. 6 5
237 34.02 radiation 10.0 43200 < th dose dependent rect. 23 1
239 34.03 precipitation 0.1 4320 < th dose independent rect. 23 1
242 34.03 atmosphere 1000.0 30 > th dose independent rect. 8 22
243 34.03 precipitation 0.1 4320 < th dose dependent rect. 23 1
248 34.04 radiation 20.0 90 < th dose independent rect. 6 7
251 34.04 radiation 10.0 30 < th dose independent rect. 18 13
253 34.04 humidity 70.0 1440 > th dose independent rect. 17 18
260 34.05 temperature 20.0 30 > th dose independent rect. 23 7
261 34.05 temperature 10.0 720 > th dose independent rect. 15 8
264 34.05 temperature 10.0 720 > th dose independent rect. 23 16
265 34.05 precipitation 0.1 720 < th dose independent rect. 11 16
268 34.05 wind 7.0 30 < th dose independent rect. 23 23
269 34.05 humidity 80.0 14400 < th dose dependent rect. 4 5
271 34.05 wind 1.0 720 > th dose dependent rect. 24 7
274 34.05 precipitation 0.1 720 < th dose dependent rect. 11 16
277 34.06 temperature 10.0 720 > th dose independent rect. 3 8
278 34.06 humidity 50.0 720 > th dose independent rect. 3 8
280 34.06 radiation 10.0 30 < th dose independent rect. 23 9
282 34.06 temperature 10.0 720 > th dose independent rect. 11 16
284 34.06 humidity 70.0 1440 < th dose independent rect. 17 19
285 34.06 radiation 1.0 90 < th dose dependent rect. 6 1
287 34.06 humidity 80.0 1440 < th dose dependent rect. 9 2
295 34.07 wind 1.0 14400 < th dose independent rect. 4 4
309 34.07 temperature 15.0 30 > th dose independent rect. 23 23
329 34.08 atmosphere 1010.0 10 < th dose independent rect. 18 23
339 34.09 wind 1.0 14400 < th dose independent rect. 4 7
352 34.09 wind 1.0 720 > th dose dependent rect. 2 1
353 34.09 temperature 25.0 10 > th dose dependent rect. 22 1
354 34.09 wind 3.0 10 < th dose dependent rect. 6 2
362 34.10 wind 1.0 14400 > th dose independent rect. 4 4
367 34.10 atmosphere 995.0 720 > th dose independent rect. 11 16
368 34.10 radiation 40.0 90 < th dose independent rect. 6 17
369 34.10 wind 7.0 30 < th dose independent rect. 8 22
370 34.10 wind 1.0 14400 < th dose dependent rect. 6 1
374 34.10 radiation 1.0 720 > th dose dependent rect. 7 2
383 34.11 atmosphere 1000.0 30 > th dose independent rect. 23 7
384 34.11 atmosphere 995.0 720 > th dose independent rect. 15 8
395 34.11 humidity 60.0 1440 > th dose dependent rect. 8 3
397 34.11 wind 1.0 14400 < th dose dependent rect. 4 4
404 34.12 wind 7.0 14400 > th dose independent rect. 9 1
405 34.12 wind 1.0 10 < th dose independent rect. 6 1
410 34.12 temperature 25.0 720 < th dose independent rect. 5 3
451 34.12 wind 1.0 14400 < th dose dependent rect. 4 6
458 34.13 wind 1.0 14400 > th dose independent rect. 4 7
473 34.13 humidity 50.0 90 > th dose independent rect. 8 22
482 34.14 radiation 40.0 1440 > th dose independent rect. 9 2
491 34.14 precipitation 0.1 720 < th dose independent rect. 11 7
493 34.14 wind 1.0 14400 < th dose independent rect. 2 9
508 34.14 radiation 1.0 10 > th dose independent rect. 8 22
509 34.14 radiation 10.0 30 < th dose independent rect. 23 23
510 34.14 radiation 30.0 720 < th dose dependent rect. 6 1
514 34.14 wind 1.0 4320 < th dose dependent rect. 19 3
519 34.14 precipitation 0.1 720 < th dose dependent rect. 11 7
520 34.14 wind 1.0 14400 < th dose dependent rect. 2 9
524 34.15 wind 9.0 1440 < th dose independent rect. 23 1
525 34.15 temperature 25.0 30 > th dose independent rect. 22 1
529 34.15 temperature 30.0 1440 < th dose independent rect. 23 1
533 34.15 humidity 50.0 1440 > th dose independent rect. 23 1
543 34.15 atmosphere 995.0 1440 > th dose independent rect. 23 1
545 34.15 radiation 1.0 1440 < th dose independent rect. 23 1
570 34.15 radiation 40.0 90 < th dose independent rect. 2 13
572 34.15 temperature 10.0 1440 > th dose independent rect. 24 23
576 34.15 atmosphere 1005.0 30 > th dose dependent rect. 22 1
578 34.15 radiation 1.0 1440 < th dose dependent rect. 23 1
596 34.15 humidity 50.0 720 > th dose dependent rect. 23 6
598 34.15 radiation 1.0 90 > th dose dependent rect. 16 19
599 34.16 wind 1.0 30 > th dose independent rect. 22 1
600 34.16 wind 3.0 30 < th dose independent rect. 22 1
604 34.16 humidity 90.0 30 < th dose independent rect. 22 1
605 34.16 atmosphere 1005.0 30 > th dose independent rect. 22 1
606 34.16 humidity 80.0 90 < th dose independent rect. 1 2
612 34.16 humidity 80.0 90 < th dose independent rect. 24 5
615 34.16 atmosphere 1010.0 10 < th dose independent rect. 18 13
622 34.16 wind 5.0 30 < th dose dependent rect. 22 1
625 34.16 temperature 10.0 30 > th dose dependent rect. 22 1
627 34.16 humidity 90.0 30 < th dose dependent rect. 22 1
628 34.16 atmosphere 995.0 30 > th dose dependent rect. 22 1
633 34.16 humidity 80.0 90 < th dose dependent rect. 1 2
634 34.16 humidity 90.0 720 < th dose dependent rect. 1 2
637 34.16 humidity 80.0 90 < th dose dependent rect. 24 5
641 34.16 radiation 1.0 720 > th dose dependent rect. 17 16
644 34.17 temperature 10.0 30 > th dose independent rect. 22 1
646 34.17 temperature 30.0 30 < th dose independent rect. 22 1
647 34.17 humidity 50.0 30 > th dose independent rect. 22 1
652 34.17 atmosphere 995.0 30 > th dose independent rect. 22 1
654 34.17 atmosphere 1010.0 30 < th dose independent rect. 22 1
656 34.17 radiation 1.0 30 < th dose independent rect. 22 1
661 34.17 precipitation 0.1 30 < th dose independent rect. 22 1
662 34.17 humidity 70.0 14400 > th dose independent rect. 6 3
676 34.17 wind 5.0 720 < th dose independent rect. 23 12
683 34.17 humidity 50.0 30 > th dose dependent rect. 22 1
688 34.17 radiation 1.0 30 < th dose dependent rect. 22 1
694 34.17 precipitation 0.1 30 < th dose dependent rect. 22 1
702 34.17 humidity 90.0 1440 < th dose dependent rect. 4 8
708 34.18 radiation 10.0 720 > th dose independent sin 11 NA
709 34.18 wind 1.0 14400 < th dose independent rect. 6 1
710 34.18 humidity 70.0 14400 > th dose independent rect. 8 1
712 34.18 humidity 90.0 10 < th dose independent rect. 3 1
724 34.18 wind 1.0 30 > th dose dependent rect. 22 1
726 34.18 humidity 80.0 90 > th dose dependent rect. 6 1
728 34.18 humidity 90.0 10 < th dose dependent rect. 3 1
730 34.18 atmosphere 1015.0 30 < th dose dependent rect. 22 1
743 34.18 wind 1.0 14400 < th dose dependent rect. 2 6
747 34.18 humidity 50.0 1440 > th dose dependent rect. 4 8
751 34.18 radiation 10.0 30 < th dose dependent rect. 23 23
760 34.19 wind 1.0 14400 > th dose independent rect. 2 9
764 34.19 atmosphere 1000.0 10 > th dose independent rect. 18 12
769 34.19 temperature 30.0 30 < th dose dependent rect. 22 1
812 34.20 temperature 25.0 720 > th dose independent rect. 23 1
813 34.20 wind 1.0 90 > th dose independent rect. 6 2
818 34.20 humidity 90.0 10 < th dose independent rect. 5 5
827 34.20 radiation 30.0 270 > th dose independent rect. 14 20
858 34.20 radiation 10.0 270 > th dose dependent rect. 14 20
860 34.21 radiation 40.0 270 > th dose independent sin 12 NA
896 34.21 temperature 15.0 10 > th dose independent rect. 18 12
900 34.21 radiation 40.0 90 < th dose independent rect. 6 12
909 34.21 atmosphere 1010.0 10 < th dose independent rect. 8 23
936 34.21 radiation 1.0 90 < th dose dependent rect. 6 9
937 34.21 humidity 50.0 10 > th dose dependent rect. 18 12
942 34.22 humidity 70.0 14400 < th dose independent rect. 8 1
945 34.22 wind 5.0 30 < th dose independent rect. 6 2
948 34.22 humidity 70.0 14400 < th dose independent rect. 6 3
953 34.22 wind 3.0 720 > th dose independent rect. 24 6
969 34.22 precipitation 0.1 10 < th dose independent rect. 6 12
971 34.22 temperature 25.0 30 > th dose dependent rect. 17 1
991 34.22 precipitation 0.1 10 < th dose dependent rect. 6 12
996 34.23 temperature 25.0 720 < th dose independent rect. 6 1