FiT-DB / Search/ Help/ Sample detail

Os11g0267000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : GUN4-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0295) R2 : 0.816
β1 : -2.47 (0.108) R2dD : 0.219 R2D : 0.11
β2 : 2.71 (0.0761) R2dC : 0.517 R2C : 0.446
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.28 (0.0629) R2dN8 : 0.225 R2N8 : 0.0856
σ : 0.554
deviance : 139.83
__
_____
C
peak time of C : 7.23
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
125.15 0.526 13.1 -1.14 2.71 0.717 0.574 -9.85 -1.09 7.25 29.7 864 -- --
138.4 0.548 13.2 -1.6 2.73 0.998 0.188 -- -0.963 7.19 17.3 24158 -- --
125.7 0.522 13.1 -1.14 2.67 0.67 -- -9.21 -1.05 7.26 29.6 875 -- --
137.12 0.545 13.3 -1.81 2.77 1.27 -- -- -1.06 7.19 17.2 8265 -- --
389.67 0.919 13.2 -0.902 -- 2.33 -- -8.53 -0.917 -- 28.9 607 -- --
139.82 0.554 13.3 -2.46 2.71 -- -0.0301 -- -1.28 7.23 -- -- -- --
139.83 0.554 13.3 -2.47 2.71 -- -- -- -1.28 7.23 -- -- -- --
411.67 0.945 13.2 -0.844 -- 2.19 -- -- -0.696 -- 25.89 501 -- --
161.31 0.592 13.1 -- 2.71 1.94 -- -- -0.577 7.2 17.9 47520 -- --
529.42 1.08 13.3 -2.42 -- -- -- -- -1.24 -- -- -- -- --
300.03 0.81 13.2 -- 2.69 -- -- -- -1.01 7.29 -- -- -- --
464.37 1 13.1 -- -- 1.96 -- -- -0.431 -- 26.1 495 -- --
683.49 1.22 13.3 -- -- -- -- -- -0.967 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.54 atmosphere 1000.0 90 > th dose independent rect. 13 14
2 117.98 atmosphere 1000.0 10 > th dose independent rect. 14 13
9 119.53 humidity 60.0 90 > th dose independent rect. 13 14
10 119.63 humidity 50.0 90 > th dose independent rect. 3 10
11 119.64 precipitation 0.1 90 < th dose independent rect. 3 10
12 119.64 precipitation 0.1 90 < th dose dependent rect. 3 10
14 119.70 temperature 20.0 90 > th dose independent rect. 13 14
19 120.29 temperature 10.0 90 > th dose independent rect. 3 10
20 120.29 atmosphere 995.0 90 > th dose independent rect. 3 10
21 120.29 atmosphere 1015.0 90 < th dose independent rect. 3 10
22 120.29 temperature 10.0 90 > th dose independent rect. 13 14
27 120.51 temperature 10.0 10 > th dose dependent rect. 14 13
36 121.08 wind 9.0 90 < th dose independent rect. 3 10
39 121.14 wind 1.0 90 > th dose independent rect. 3 10
40 121.15 wind 9.0 90 < th dose independent rect. 13 14
42 121.32 temperature 20.0 270 > th dose independent rect. 21 5
44 121.36 temperature 30.0 720 < th dose independent rect. 15 23
45 121.39 precipitation 0.1 10 < th dose independent rect. 3 11
46 121.39 precipitation 0.1 10 < th dose dependent rect. 3 11
54 121.91 precipitation 0.1 90 < th dose independent rect. 13 14
55 121.91 precipitation 0.1 90 < th dose dependent rect. 13 14
56 121.95 atmosphere 1015.0 90 < th dose independent rect. 13 14
60 122.06 temperature 30.0 720 < th dose independent rect. 21 23
63 122.13 humidity 60.0 720 > th dose independent rect. 14 1
72 122.31 radiation 40.0 10 < th dose independent rect. 14 13
73 122.35 temperature 20.0 10 > th dose independent rect. 22 6
74 122.40 precipitation 0.1 10 < th dose independent rect. 14 13
75 122.40 precipitation 0.1 10 < th dose dependent rect. 14 13
78 122.49 temperature 30.0 720 < th dose independent rect. 23 23
88 122.56 temperature 10.0 10 > th dose independent rect. 3 11
90 122.56 atmosphere 995.0 10 > th dose independent rect. 3 11
91 122.56 atmosphere 1015.0 10 < th dose independent rect. 3 11
92 122.56 temperature 10.0 10 > th dose independent rect. 14 13
100 122.76 temperature 30.0 90 < th dose independent rect. 13 14
106 122.90 wind 7.0 720 < th dose independent rect. 17 11
112 122.99 wind 7.0 720 < th dose independent rect. 16 13
118 123.04 temperature 30.0 720 < th dose independent rect. 5 15
121 123.11 atmosphere 995.0 90 > th dose dependent rect. 13 14
122 123.12 wind 9.0 10 < th dose independent rect. 14 13
125 123.19 temperature 30.0 90 < th dose independent rect. 3 10
128 123.23 humidity 50.0 720 > th dose independent rect. 13 4
132 123.27 humidity 60.0 720 > th dose independent rect. 13 11
133 123.29 temperature 30.0 720 < th dose independent rect. 8 9
134 123.30 atmosphere 995.0 90 > th dose dependent rect. 3 10
144 123.37 wind 9.0 10 < th dose independent rect. 3 11
157 123.51 atmosphere 1015.0 10 < th dose independent rect. 14 13
161 123.54 temperature 30.0 720 < th dose independent rect. 3 18
163 123.55 temperature 30.0 720 < th dose independent sin 23 NA
167 123.58 temperature 30.0 720 < th dose independent rect. 19 23
180 123.72 wind 7.0 720 < th dose independent rect. 16 6
184 123.74 humidity 60.0 720 > th dose independent rect. 4 13
194 123.84 temperature 20.0 30 > th dose independent rect. 20 8
196 123.84 wind 1.0 720 > th dose independent rect. 17 20
202 123.88 humidity 60.0 720 > th dose independent rect. 5 11
203 123.88 atmosphere 995.0 10 > th dose dependent rect. 3 11
216 123.98 wind 1.0 90 < th dose independent rect. 24 1
217 123.98 atmosphere 1010.0 720 < th dose independent rect. 22 1
229 124.08 atmosphere 995.0 720 > th dose independent rect. 4 13
252 124.28 temperature 30.0 720 < th dose independent rect. 9 7
255 124.29 atmosphere 995.0 720 > th dose independent rect. 13 4
257 124.31 atmosphere 995.0 720 > th dose independent rect. 13 19
264 124.39 atmosphere 995.0 720 > th dose independent rect. 5 11
267 124.41 temperature 10.0 1440 > th dose independent rect. 4 11
270 124.41 temperature 10.0 1440 > th dose independent rect. 15 13
281 124.47 atmosphere 995.0 720 > th dose independent rect. 5 20
290 124.52 wind 1.0 90 < th dose dependent rect. 24 1
296 124.64 atmosphere 1000.0 720 > th dose independent rect. 14 1
315 124.77 humidity 60.0 720 > th dose independent rect. 22 18
319 124.81 precipitation 0.1 270 < th dose independent rect. 16 13
320 124.81 precipitation 0.1 270 < th dose dependent rect. 16 13
336 124.88 wind 1.0 90 < th dose independent rect. 23 3
352 124.99 humidity 80.0 43200 > th dose independent rect. 6 1
367 125.07 temperature 20.0 720 > th dose independent rect. 14 1
383 125.14 wind 1.0 720 > th dose independent rect. 24 5
400 125.24 temperature 20.0 720 > th dose independent rect. 10 9
402 125.24 humidity 50.0 720 > th dose independent rect. 13 19
412 125.26 atmosphere 995.0 720 > th dose independent rect. 22 18
416 125.28 wind 1.0 720 > th dose independent rect. 24 20
425 125.31 atmosphere 995.0 10 > th dose dependent rect. 14 13
433 125.37 humidity 80.0 43200 < th dose independent rect. 6 2
452 125.42 humidity 50.0 720 > th dose independent rect. 5 20
464 125.46 temperature 20.0 720 > th dose independent rect. 13 4
469 125.47 atmosphere 995.0 720 > th dose independent rect. 14 10
482 125.52 precipitation 0.1 720 < th dose independent rect. 17 11
484 125.52 precipitation 0.1 720 < th dose dependent rect. 17 11
493 125.56 atmosphere 995.0 720 > th dose independent rect. 20 21
517 125.65 temperature 30.0 270 < th dose independent sin 20 NA
524 125.67 humidity 60.0 90 > th dose independent rect. 13 4
525 125.67 precipitation 0.1 720 < th dose independent rect. 10 18
526 125.67 precipitation 0.1 720 < th dose dependent rect. 10 18
530 125.68 wind 1.0 90 < th dose independent rect. 12 14
532 125.68 humidity 50.0 90 > th dose dependent rect. 13 14
544 125.71 precipitation 0.1 720 < th dose independent rect. 1 19
545 125.71 precipitation 0.1 720 < th dose dependent rect. 1 19
559 125.78 radiation 20.0 90 < th dose independent sin 13 NA
561 125.78 temperature 10.0 720 > th dose dependent rect. 10 9
565 125.81 atmosphere 1000.0 90 > th dose dependent rect. 13 4
570 125.83 precipitation 0.1 720 < th dose independent rect. 16 6
571 125.83 precipitation 0.1 720 < th dose dependent rect. 16 6
594 125.91 precipitation 0.1 720 < th dose independent rect. 10 10
596 125.91 precipitation 0.1 720 < th dose dependent rect. 10 10
604 125.94 wind 9.0 720 < th dose independent rect. 1 19
625 126.00 precipitation 0.1 720 < th dose independent rect. 17 20
627 126.00 precipitation 0.1 720 < th dose dependent rect. 17 20
650 126.08 precipitation 0.1 720 < th dose independent rect. 23 15
651 126.08 precipitation 0.1 720 < th dose dependent rect. 23 15
662 126.10 temperature 15.0 270 > th dose dependent rect. 20 7
677 126.14 wind 9.0 720 < th dose independent rect. 16 21
686 126.17 wind 7.0 43200 < th dose independent rect. 19 1
693 126.19 wind 1.0 90 < th dose independent rect. 17 9
703 126.22 wind 9.0 720 < th dose independent rect. 10 18
710 126.24 temperature 20.0 10 > th dose independent rect. 20 10
711 126.24 atmosphere 1000.0 270 > th dose independent rect. 21 11
718 126.26 temperature 10.0 10 > th dose dependent rect. 14 16
738 126.32 atmosphere 1010.0 720 < th dose dependent rect. 21 4
748 126.35 precipitation 0.1 720 < th dose independent rect. 16 4
755 126.35 precipitation 0.1 720 < th dose dependent rect. 16 4
761 126.36 temperature 10.0 720 > th dose dependent rect. 9 12
762 126.37 wind 1.0 90 > th dose independent sin 18 NA
811 126.47 atmosphere 995.0 30 > th dose independent rect. 7 11
816 126.48 wind 1.0 90 < th dose independent rect. 7 19
832 126.50 humidity 60.0 10 > th dose independent rect. 18 13
844 126.52 wind 1.0 720 > th dose independent rect. 24 14
860 126.54 precipitation 0.1 720 < th dose independent rect. 17 18
861 126.54 precipitation 0.1 720 < th dose dependent rect. 17 18
875 126.58 atmosphere 1010.0 720 < th dose dependent rect. 20 6
887 126.59 temperature 15.0 10 > th dose dependent rect. 22 6
888 126.60 atmosphere 1005.0 90 > th dose independent rect. 13 4
889 126.60 atmosphere 1000.0 720 > th dose independent rect. 20 5
890 126.60 wind 1.0 720 > th dose independent rect. 8 6
892 126.60 temperature 20.0 30 > th dose independent rect. 7 11
903 126.62 precipitation 0.1 720 < th dose independent rect. 8 21
908 126.62 precipitation 0.1 720 < th dose dependent rect. 8 21
910 126.63 wind 1.0 270 > th dose independent rect. 8 13
935 126.70 wind 7.0 43200 > th dose independent rect. 19 1
952 126.73 wind 9.0 90 < th dose independent rect. 7 10
956 126.74 humidity 50.0 14400 > th dose independent rect. 18 14
959 126.75 temperature 15.0 270 > th dose independent rect. 5 11
962 126.75 atmosphere 1015.0 30 < th dose independent rect. 7 11
963 126.75 temperature 10.0 30 > th dose independent rect. 18 13
965 126.75 radiation 20.0 30 < th dose independent rect. 18 13
971 126.77 humidity 80.0 43200 > th dose independent rect. 5 3
990 126.79 wind 7.0 43200 < th dose independent rect. 17 5
991 126.79 atmosphere 995.0 30 > th dose independent rect. 18 13
995 126.80 precipitation 0.1 720 < th dose independent rect. 8 14
996 126.80 wind 7.0 720 < th dose independent rect. 17 18
1000 126.80 precipitation 0.1 720 < th dose dependent rect. 8 14