Os11g0266800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide region domain containing protein.
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Os11g0266800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.06 | 0.221 | 10.1 | -0.22 | 0.597 | -0.373 | -0.32 | -1.39 | 0.125 | 7.46 | 0.1501 | 4500 | -- | -- |
| 22.52 | 0.221 | 10.1 | -0.223 | 0.603 | -0.477 | -0.226 | -- | 0.13 | 7.51 | 0.9811 | 2370 | -- | -- |
| 22.31 | 0.22 | 10.1 | -0.214 | 0.596 | -0.331 | -- | -1.18 | 0.134 | 7.54 | 0.7388 | 4772 | -- | -- |
| 22.71 | 0.222 | 10.1 | -0.222 | 0.599 | -0.485 | -- | -- | 0.125 | 7.48 | 1 | 2370 | -- | -- |
| 41.24 | 0.299 | 10.1 | -0.195 | -- | -0.315 | -- | -1.02 | 0.132 | -- | 1.002 | 4200 | -- | -- |
| 25.93 | 0.239 | 10.1 | -0.0811 | 0.601 | -- | -0.284 | -- | 0.0926 | 7.45 | -- | -- | -- | -- |
| 26.15 | 0.239 | 10.1 | -0.0875 | 0.6 | -- | -- | -- | 0.0932 | 7.47 | -- | -- | -- | -- |
| 41.66 | 0.301 | 10.1 | -0.221 | -- | -0.492 | -- | -- | 0.138 | -- | 0.9998 | 2704 | -- | -- |
| 23.89 | 0.228 | 10.1 | -- | 0.596 | -0.384 | -- | -- | 0.141 | 7.56 | 1 | 2380 | -- | -- |
| 45.4 | 0.315 | 10.1 | -0.0783 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 26.35 | 0.24 | 10.1 | -- | 0.6 | -- | -- | -- | 0.103 | 7.48 | -- | -- | -- | -- |
| 42.79 | 0.305 | 10.1 | -- | -- | -0.397 | -- | -- | 0.153 | -- | 1 | 2704 | -- | -- |
| 45.56 | 0.315 | 10.1 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 2 | 20.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 3 | 20.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 4 | 20.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 9 | 20.43 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 12 | 20.44 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 17 | 20.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 21 | 20.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 24 | 20.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 32 | 20.49 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 40 | 20.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 65 | 20.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 68 | 20.56 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 72 | 20.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 90 | 20.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 98 | 20.60 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 120 | 20.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 137 | 20.64 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 140 | 20.65 | wind | 3.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 179 | 20.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 183 | 20.69 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 195 | 20.70 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 15 |
| 202 | 20.70 | wind | 3.0 | 43200 | < th | dose independent | rect. | 15 | 22 |
| 203 | 20.70 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 223 | 20.72 | wind | 3.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 244 | 20.74 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 256 | 20.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 257 | 20.75 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 282 | 20.77 | wind | 3.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 322 | 20.80 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 328 | 20.80 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 329 | 20.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 336 | 20.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 15 | 22 |
| 398 | 20.84 | wind | 3.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 451 | 20.87 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 453 | 20.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 468 | 20.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 481 | 20.88 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 529 | 20.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 549 | 20.90 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 551 | 20.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 558 | 20.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 597 | 20.93 | wind | 3.0 | 43200 | < th | dose independent | no | NA | NA |
| 648 | 20.95 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 779 | 21.01 | wind | 3.0 | 43200 | > th | dose independent | no | NA | NA |
| 824 | 21.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 866 | 21.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 892 | 21.05 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 901 | 21.05 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 903 | 21.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 916 | 21.06 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 924 | 21.06 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 925 | 21.06 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 933 | 21.07 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 951 | 21.08 | wind | 3.0 | 43200 | < th | dose dependent | no | NA | NA |