Os11g0264200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0264200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.85 | 0.265 | 7.09 | 0.021 | 0.271 | -0.429 | 0.451 | -0.0295 | 0.107 | 10.7 | 80 | 279 | -- | -- |
| 31.85 | 0.263 | 7.09 | 0.0228 | 0.27 | -0.427 | 0.441 | -- | 0.108 | 10.6 | 79.85 | 278 | -- | -- |
| 32.46 | 0.265 | 7.08 | 0.0417 | 0.304 | -0.368 | -- | 0.0639 | 0.102 | 9.62 | 79.86 | 243 | -- | -- |
| 32.48 | 0.265 | 7.09 | 0.0386 | 0.305 | -0.368 | -- | -- | 0.101 | 9.62 | 79.85 | 243 | -- | -- |
| 34.01 | 0.272 | 7.09 | 0.0676 | -- | -0.535 | -- | 0.0034 | 0.113 | -- | 76.66 | 512 | -- | -- |
| 37.25 | 0.286 | 7.09 | 0.0298 | 0.483 | -- | -0.171 | -- | 0.088 | 6.4 | -- | -- | -- | -- |
| 37.32 | 0.286 | 7.08 | 0.028 | 0.482 | -- | -- | -- | 0.0888 | 6.5 | -- | -- | -- | -- |
| 34.01 | 0.272 | 7.09 | 0.0674 | -- | -0.535 | -- | -- | 0.112 | -- | 76.58 | 512 | -- | -- |
| 32.52 | 0.266 | 7.09 | -- | 0.305 | -0.367 | -- | -- | 0.0966 | 9.6 | 79.79 | 243 | -- | -- |
| 49.39 | 0.328 | 7.09 | 0.04 | -- | -- | -- | -- | 0.0988 | -- | -- | -- | -- | -- |
| 37.34 | 0.286 | 7.09 | -- | 0.482 | -- | -- | -- | 0.0857 | 6.49 | -- | -- | -- | -- |
| 34.13 | 0.272 | 7.09 | -- | -- | -0.531 | -- | -- | 0.106 | -- | 76.6 | 506 | -- | -- |
| 49.43 | 0.328 | 7.09 | -- | -- | -- | -- | -- | 0.0944 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.05 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 3 | 31.13 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 5 | 31.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 9 | 31.30 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 11 | 31.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 14 | 31.37 | temperature | 25.0 | 720 | > th | dose independent | rect. | 8 | 5 |
| 18 | 31.43 | humidity | 80.0 | 270 | < th | dose independent | rect. | 8 | 22 |
| 21 | 31.45 | humidity | 80.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 28 | 31.48 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 30 | 31.48 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 36 | 31.50 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 47 | 31.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 13 |
| 59 | 31.60 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 13 |
| 79 | 31.67 | humidity | 80.0 | 270 | < th | dose independent | rect. | 8 | 12 |
| 129 | 31.83 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 12 |
| 134 | 31.85 | humidity | 80.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 136 | 31.85 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 137 | 31.86 | humidity | 80.0 | 270 | < th | dose independent | no | NA | NA |
| 141 | 31.86 | humidity | 80.0 | 270 | < th | dose independent | rect. | 15 | 23 |
| 161 | 31.89 | humidity | 80.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 162 | 31.89 | humidity | 80.0 | 270 | < th | dose independent | rect. | 3 | 23 |
| 210 | 31.97 | humidity | 80.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 211 | 31.97 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 229 | 32.01 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 16 |
| 252 | 32.05 | humidity | 80.0 | 270 | > th | dose independent | no | NA | NA |
| 257 | 32.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 261 | 32.06 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 264 | 32.07 | humidity | 80.0 | 270 | < th | dose independent | sin | 23 | NA |
| 302 | 32.13 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 320 | 32.17 | humidity | 80.0 | 720 | < th | dose independent | rect. | 8 | 5 |
| 350 | 32.21 | temperature | 20.0 | 10 | > th | dose dependent | sin | 19 | NA |
| 370 | 32.25 | humidity | 80.0 | 270 | > th | dose independent | sin | 0 | NA |
| 371 | 32.25 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 478 | 32.36 | radiation | 10.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 486 | 32.37 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 507 | 32.38 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 540 | 32.42 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 541 | 32.42 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 566 | 32.45 | temperature | 25.0 | 270 | > th | dose dependent | no | NA | NA |
| 573 | 32.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 576 | 32.46 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 588 | 32.47 | temperature | 20.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 598 | 32.48 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 599 | 32.48 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 11 |
| 616 | 32.49 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 619 | 32.49 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 658 | 32.51 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 664 | 32.51 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 730 | 32.55 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 12 |
| 742 | 32.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 781 | 32.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 782 | 32.58 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 792 | 32.58 | temperature | 20.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 801 | 32.59 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 820 | 32.60 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 821 | 32.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 863 | 32.63 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 864 | 32.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 881 | 32.63 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 889 | 32.64 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 890 | 32.64 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 916 | 32.65 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 18 |
| 923 | 32.65 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 927 | 32.65 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 928 | 32.65 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 18 |
| 948 | 32.66 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 975 | 32.68 | humidity | 80.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 998 | 32.68 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |