Os11g0256000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acetolactate synthase, small subunit family protein.
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Os11g0256000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acetolactate synthase, small subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.02 | 0.355 | 11.1 | 1.22 | 1.54 | 0.623 | -0.0542 | 0.175 | 0.497 | 21 | 20.51 | 1066 | -- | -- |
| 57.1 | 0.352 | 11.1 | 1.19 | 1.55 | 0.602 | -0.00889 | -- | 0.49 | 21 | 20.5 | 1065 | -- | -- |
| 57.03 | 0.352 | 11.1 | 1.22 | 1.54 | 0.621 | -- | 0.163 | 0.497 | 21 | 20.53 | 1069 | -- | -- |
| 57.09 | 0.352 | 11.1 | 1.19 | 1.55 | 0.602 | -- | -- | 0.491 | 21 | 20.52 | 1069 | -- | -- |
| 184.15 | 0.632 | 11.1 | 1.15 | -- | 1.02 | -- | 0.467 | 0.402 | -- | 20.5 | 789 | -- | -- |
| 66.5 | 0.382 | 11.1 | 1.43 | 1.59 | -- | -0.0408 | -- | 0.627 | 21.1 | -- | -- | -- | -- |
| 66.5 | 0.382 | 11.1 | 1.43 | 1.59 | -- | -- | -- | 0.627 | 21.1 | -- | -- | -- | -- |
| 160.01 | 0.589 | 11.1 | 1.11 | -- | 1.07 | -- | -- | 0.296 | -- | 25.89 | 671 | -- | -- |
| 71.06 | 0.393 | 11.2 | -- | 1.58 | 1.12 | -- | -- | 0.204 | 21.1 | 18.39 | 47520 | -- | -- |
| 213.01 | 0.682 | 11.1 | 1.43 | -- | -- | -- | -- | 0.619 | -- | -- | -- | -- | -- |
| 120.39 | 0.513 | 11.1 | -- | 1.59 | -- | -- | -- | 0.468 | 21.2 | -- | -- | -- | -- |
| 191.16 | 0.644 | 11.2 | -- | -- | 1.24 | -- | -- | 0.137 | -- | 25.83 | 674 | -- | -- |
| 267.24 | 0.763 | 11.1 | -- | -- | -- | -- | -- | 0.459 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.58 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 51.61 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 52.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 52.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 5 | 52.74 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 13 | 53.46 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 16 | 53.76 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 40 | 54.63 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 42 | 54.66 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 43 | 54.68 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 45 | 54.73 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 6 |
| 70 | 55.37 | temperature | 20.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 74 | 55.42 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 5 |
| 76 | 55.44 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 86 | 55.50 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 93 | 55.56 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 103 | 55.66 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 2 |
| 159 | 56.03 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 165 | 56.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 168 | 56.07 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 180 | 56.10 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 189 | 56.13 | temperature | 20.0 | 720 | > th | dose independent | sin | 11 | NA |
| 215 | 56.21 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 265 | 56.35 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 13 | 22 |
| 280 | 56.39 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 347 | 56.56 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 3 |
| 381 | 56.66 | temperature | 20.0 | 720 | < th | dose independent | sin | 9 | NA |
| 487 | 56.96 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 488 | 56.96 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 572 | 57.15 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 580 | 57.17 | humidity | 90.0 | 30 | > th | dose independent | rect. | 22 | 12 |
| 606 | 57.21 | humidity | 90.0 | 30 | > th | dose independent | sin | 8 | NA |
| 621 | 57.22 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 640 | 57.25 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 682 | 57.33 | humidity | 90.0 | 30 | > th | dose independent | rect. | 13 | 21 |
| 686 | 57.33 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 9 |
| 710 | 57.36 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 737 | 57.39 | humidity | 90.0 | 30 | > th | dose independent | rect. | 17 | 17 |
| 786 | 57.45 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 832 | 57.53 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 5 |
| 840 | 57.54 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 946 | 57.68 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 953 | 57.68 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 981 | 57.70 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |