Os11g0246600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S1C, HrtA/DegP2/Q/S family protein.
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Os11g0246600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S1C, HrtA/DegP2/Q/S family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.12 | 0.683 | 6.19 | -1.81 | 0.966 | 0.848 | 0.0177 | 0.2 | 0.169 | 18.7 | 24.81 | 775 | -- | -- |
| 211.19 | 0.677 | 6.19 | -1.76 | 0.936 | 0.851 | -0.0541 | -- | 0.183 | 18.7 | 24.8 | 810 | -- | -- |
| 211.13 | 0.677 | 6.19 | -1.81 | 0.966 | 0.848 | -- | 0.193 | 0.17 | 18.7 | 24.8 | 775 | -- | -- |
| 211.18 | 0.677 | 6.19 | -1.75 | 0.937 | 0.867 | -- | -- | 0.187 | 18.8 | 24.8 | 810 | -- | -- |
| 233.57 | 0.712 | 6.17 | -1.66 | -- | 1.12 | -- | -0.0223 | 0.158 | -- | 24.83 | 2730 | -- | -- |
| 236.94 | 0.722 | 6.25 | -2.02 | 0.759 | -- | -0.0404 | -- | -0.135 | 17.4 | -- | -- | -- | -- |
| 236.94 | 0.721 | 6.25 | -2.02 | 0.759 | -- | -- | -- | -0.135 | 17.4 | -- | -- | -- | -- |
| 233.35 | 0.711 | 6.17 | -1.66 | -- | 1.14 | -- | -- | 0.139 | -- | 24.91 | 2730 | -- | -- |
| 286.06 | 0.788 | 6.14 | -- | 0.989 | 1.25 | -- | -- | 0.474 | 19.2 | 24.7 | 822 | -- | -- |
| 266.95 | 0.763 | 6.24 | -2.05 | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
| 344.98 | 0.869 | 6.2 | -- | 0.793 | -- | -- | -- | 0.0901 | 17.3 | -- | -- | -- | -- |
| 240.59 | 0.722 | 6.06 | -- | -- | 1.77 | -- | -- | 0.627 | -- | 20.62 | 47520 | -- | -- |
| 377.85 | 0.907 | 6.19 | -- | -- | -- | -- | -- | 0.0733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.85 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 11 | 204.70 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 14 | 205.12 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 19 | 205.38 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 28 | 206.08 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 31 | 206.17 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 39 | 206.63 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 44 | 206.90 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 45 | 206.91 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 50 | 206.98 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 51 | 206.99 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 52 | 207.00 | temperature | 25.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 109 | 208.21 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 119 | 208.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 141 | 208.54 | temperature | 25.0 | 720 | < th | dose independent | sin | 12 | NA |
| 169 | 208.79 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 172 | 208.81 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 180 | 208.86 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 190 | 208.90 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 2 | 6 |
| 193 | 208.91 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 198 | 208.93 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 200 | 208.93 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 2 | 5 |
| 214 | 209.01 | temperature | 25.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 234 | 209.08 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 244 | 209.11 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 268 | 209.20 | temperature | 25.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 293 | 209.27 | temperature | 25.0 | 720 | > th | dose independent | rect. | 11 | 20 |
| 340 | 209.40 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 383 | 209.51 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 407 | 209.57 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 17 |
| 434 | 209.63 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 561 | 209.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 563 | 209.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 565 | 209.91 | temperature | 25.0 | 720 | > th | dose independent | sin | 12 | NA |
| 566 | 209.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 581 | 209.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 583 | 209.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 587 | 209.96 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 8 | NA |
| 609 | 210.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 621 | 210.03 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 687 | 210.16 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 781 | 210.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 802 | 210.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 860 | 210.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 861 | 210.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 864 | 210.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 11 |
| 892 | 210.49 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 919 | 210.53 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 939 | 210.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 996 | 210.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 13 |
| 998 | 210.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 13 |