Os11g0245800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0245800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.88 | 0.401 | 8.81 | -0.357 | 0.979 | 0.56 | -0.259 | 4.29 | 0.696 | 22.6 | 0.2494 | 4842 | -- | -- |
| 78.38 | 0.412 | 8.86 | -0.29 | 0.985 | 0.99 | -0.271 | -- | 0.704 | 22.6 | 0.582 | 3842 | -- | -- |
| 73.15 | 0.398 | 8.81 | -0.345 | 0.982 | 0.553 | -- | 4.29 | 0.696 | 22.6 | 0.2937 | 4842 | -- | -- |
| 78.67 | 0.413 | 8.86 | -0.265 | 0.975 | 0.997 | -- | -- | 0.702 | 22.6 | 0.5103 | 2933 | -- | -- |
| 132.3 | 0.536 | 8.78 | -0.337 | -- | 0.526 | -- | 4.64 | 0.705 | -- | 0.3128 | 4839 | -- | -- |
| 95.48 | 0.458 | 8.87 | -0.00565 | 0.993 | -- | -0.198 | -- | 0.65 | 22.7 | -- | -- | -- | -- |
| 95.64 | 0.458 | 8.87 | 0.00254 | 0.995 | -- | -- | -- | 0.651 | 22.7 | -- | -- | -- | -- |
| 136.31 | 0.544 | 8.85 | -0.353 | -- | 1.1 | -- | -- | 0.698 | -- | 0.5 | 2137 | -- | -- |
| 80.33 | 0.417 | 8.86 | -- | 0.98 | 0.905 | -- | -- | 0.725 | 22.6 | 0.7076 | 3007 | -- | -- |
| 156.64 | 0.585 | 8.85 | 0.0215 | -- | -- | -- | -- | 0.656 | -- | -- | -- | -- | -- |
| 95.64 | 0.457 | 8.87 | -- | 0.995 | -- | -- | -- | 0.65 | 22.7 | -- | -- | -- | -- |
| 138.05 | 0.547 | 8.83 | -- | -- | 1.08 | -- | -- | 0.728 | -- | 0.7338 | 2200 | -- | -- |
| 156.65 | 0.584 | 8.85 | -- | -- | -- | -- | -- | 0.653 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 6 |
| 2 | 72.12 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 4 | 72.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 5 | 72.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 10 | 72.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 24 | 72.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 20 |
| 25 | 72.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 20 |
| 26 | 72.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 20 |
| 36 | 73.10 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 23 | NA |
| 44 | 73.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 6 |
| 49 | 73.17 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 23 | NA |
| 52 | 73.17 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 23 | NA |
| 53 | 73.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 60 | 73.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 61 | 73.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 9 |
| 64 | 73.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 23 |
| 66 | 73.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 70 | 73.24 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 75 | 73.25 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 6 |
| 82 | 73.25 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 6 |
| 93 | 73.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 22 |
| 99 | 73.33 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 101 | 73.34 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 102 | 73.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 106 | 73.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 116 | 73.37 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 130 | 73.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 23 |
| 134 | 73.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 19 |
| 135 | 73.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 22 |
| 143 | 73.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 144 | 73.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 22 |
| 149 | 73.46 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 22 |
| 151 | 73.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 17 |
| 155 | 73.46 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 22 |
| 160 | 73.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 22 |
| 163 | 73.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 172 | 73.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 22 |
| 179 | 73.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 20 |
| 185 | 73.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 20 |
| 201 | 73.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 19 |
| 207 | 73.51 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 230 | 73.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 15 |
| 233 | 73.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 235 | 73.53 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 248 | 73.54 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 249 | 73.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 260 | 73.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 261 | 73.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 13 |
| 269 | 73.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 277 | 73.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 284 | 73.56 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 285 | 73.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 291 | 73.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 23 |
| 304 | 73.58 | precipitation | 0.1 | 4320 | > th | dose independent | no | NA | NA |
| 305 | 73.58 | precipitation | 0.1 | 4320 | < th | dose independent | no | NA | NA |
| 314 | 73.58 | precipitation | 0.1 | 4320 | < th | dose dependent | no | NA | NA |
| 372 | 73.63 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 13 |
| 380 | 73.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 382 | 73.63 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 13 |
| 478 | 73.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 483 | 73.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 491 | 73.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 518 | 73.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 531 | 73.86 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 552 | 73.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 558 | 73.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 575 | 73.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 577 | 73.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 9 |
| 599 | 73.97 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 610 | 73.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 654 | 74.06 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 14 | NA |
| 658 | 74.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 23 |
| 660 | 74.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 23 |
| 670 | 74.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 699 | 74.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 798 | 74.27 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 2 | NA |
| 811 | 74.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 856 | 74.34 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 897 | 74.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 973 | 74.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 15 |
| 976 | 74.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 18 |