FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0244600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Epsin, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.46 (0.0797) R2 : 0.756
β1 : -2.6 (0.503) R2dD : 0.0781 R2D : 0.257
β2 : 1.29 (0.146) R2dC : 0.0418 R2C : 0.0475
β3 : -4.74 (0.292) R2dE : 0.281 R2E : 0.334
β4 : 4.99 (0.579) R2dD*C : 0.0402 R2D*C : 0.0632
β5 : 11.7 (2.02) R2dD*E : 0.0987 R2D*E : 0.193
γ1 : -0.745 (0.183) R2dN8 : 0.0244 R2N8 : 0.0479
σ : 1.13
deviance : 577.03
__
_____
C
peak time of C : 21.7
E
wheather : temperature
threshold : 24
memory length : 1200
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 6.03
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
577.03 1.13 6.46 -2.6 1.29 -4.74 4.99 11.7 -0.745 21.7 24 1200 6.03 --
608 1.15 6.72 -5.02 1.6 -3.04 4.49 -- -1.27 21.8 22.4 2359 7.51 --
660.91 1.2 6.44 -2.6 1.4 -4.59 -- 12.1 -0.673 22 23.49 1073 7.32 --
685.5 1.22 6.69 -5.1 1.53 -3.18 -- -- -1.21 19.3 21.95 1932 1.59 --
736.01 1.26 6.37 -2.72 -- -5.01 -- 10.9 -0.315 -- 22.53 853 4.58 --
943.79 1.44 6.9 -6.1 1.72 -- 4.87 -- -2.03 20.4 -- -- -- --
1004.52 1.48 6.9 -6.23 1.82 -- -- -- -2.02 19.3 -- -- -- --
729.98 1.26 6.67 -5.17 -- -4 -- -- -1.12 -- 19.99 863 4.91 --
747.71 1.27 6.34 -- 1.56 -6.01 -- -- 0.433 19.5 7.248 29585 3.82 --
1181.15 1.61 6.86 -6.26 -- -- -- -- -2.05 -- -- -- -- --
2027.24 2.11 6.74 -- 1.89 -- -- -- -1.33 19.1 -- -- -- --
799.43 1.32 6.49 -- -- -6.68 -- -- 0.458 -- -33.32 29504 4.73 --
2214.84 2.2 6.7 -- -- -- -- -- -1.36 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 568.36 radiation 1 14400 < th dose dependent rect. 2 3
2 571.19 radiation 1 14400 < th dose dependent rect. 4 1
9 585.84 radiation 1 1440 < th dose dependent rect. 18 11
12 591.10 radiation 1 43200 < th dose dependent rect. 21 8
14 591.93 humidity 90 43200 > th dose independent rect. 23 1
17 594.15 radiation 1 14400 > th dose independent rect. 18 11
19 594.24 radiation 1 14400 > th dose independent rect. 18 1
29 594.46 humidity 90 43200 > th dose dependent rect. 23 1
31 595.51 radiation 1 14400 < th dose independent rect. 18 11
32 595.58 temperature 25 1440 > th dose dependent sin 11 NA
33 597.30 radiation 1 14400 < th dose independent rect. 18 9
36 597.77 radiation 1 14400 < th dose independent rect. 18 7
38 597.90 radiation 1 14400 < th dose independent rect. 18 2
45 598.55 temperature 25 1440 > th dose dependent rect. 18 7
50 599.02 temperature 25 1440 > th dose dependent rect. 17 16
61 600.38 temperature 25 1440 < th dose independent rect. 20 4
62 600.38 radiation 1 1440 < th dose dependent rect. 18 7
64 600.67 temperature 25 1440 > th dose independent rect. 19 5
69 601.29 radiation 1 1440 < th dose dependent rect. 18 2
72 601.38 radiation 40 14400 < th dose dependent rect. 18 9
86 602.43 radiation 1 1440 < th dose dependent rect. 18 4
102 603.45 radiation 10 14400 < th dose dependent rect. 18 2
105 603.56 temperature 25 4320 > th dose independent rect. 17 1
127 604.74 radiation 10 14400 < th dose dependent rect. 18 7
139 605.61 temperature 20 14400 > th dose independent rect. 24 2
146 605.74 temperature 25 4320 < th dose independent rect. 17 1
148 605.79 humidity 80 43200 > th dose independent rect. 12 1
162 606.53 radiation 1 1440 < th dose dependent rect. 22 7
184 607.47 radiation 1 1440 < th dose dependent rect. 20 9
196 607.82 temperature 25 1440 > th dose dependent rect. 20 1
205 608.02 temperature 20 14400 > th dose independent rect. 22 5
208 608.21 temperature 20 14400 > th dose independent rect. 21 9
227 608.63 humidity 90 43200 > th dose dependent rect. 18 11
237 608.95 humidity 90 43200 > th dose independent rect. 18 9
255 609.30 temperature 20 14400 < th dose independent rect. 21 9
263 609.44 temperature 20 14400 < th dose independent rect. 1 1
301 610.36 humidity 90 43200 < th dose independent rect. 22 3
304 610.39 temperature 25 14400 > th dose independent rect. 10 2
318 610.73 temperature 25 1440 > th dose dependent rect. 8 23
319 610.74 temperature 20 14400 < th dose independent rect. 22 4
325 610.85 temperature 20 14400 < th dose independent rect. 24 6
332 610.93 temperature 25 1440 > th dose dependent rect. 8 18
335 610.95 temperature 25 1440 > th dose dependent rect. 5 21
353 611.09 temperature 25 1440 > th dose dependent no NA NA
364 611.16 temperature 25 1440 > th dose dependent rect. 11 23
375 611.28 humidity 90 43200 > th dose dependent sin 14 NA
377 611.30 temperature 20 14400 > th dose independent rect. 4 2
413 611.63 temperature 20 14400 < th dose independent rect. 4 2
461 612.57 temperature 25 1440 > th dose dependent rect. 22 23
491 612.83 wind 7 43200 > th dose independent rect. 10 5
512 613.21 humidity 90 43200 < th dose independent rect. 17 10
525 613.39 wind 7 43200 < th dose independent rect. 10 4
540 613.62 humidity 80 43200 < th dose independent rect. 12 1
542 613.65 humidity 90 43200 > th dose independent sin 14 NA
543 613.67 temperature 25 14400 < th dose independent rect. 10 2
557 614.00 radiation 30 1440 < th dose dependent rect. 18 11
597 614.73 radiation 1 14400 < th dose dependent rect. 6 23
606 614.92 temperature 20 14400 > th dose dependent rect. 22 1
614 615.08 radiation 1 14400 < th dose dependent rect. 6 13
669 615.90 wind 7 43200 > th dose dependent rect. 10 5
684 616.23 humidity 90 43200 < th dose independent rect. 10 1
719 616.78 radiation 1 14400 < th dose dependent rect. 6 21
745 617.00 temperature 20 14400 > th dose independent sin 11 NA
771 617.35 humidity 90 43200 > th dose dependent rect. 4 1
800 617.68 radiation 1 14400 < th dose dependent rect. 18 21
813 617.91 humidity 90 43200 > th dose dependent rect. 2 4
848 618.53 temperature 20 14400 < th dose independent sin 11 NA
861 618.64 temperature 25 14400 < th dose independent rect. 7 6
912 619.21 temperature 30 1440 < th dose independent rect. 11 5
929 619.45 temperature 25 14400 > th dose independent rect. 4 9
985 620.27 humidity 90 43200 < th dose independent rect. 18 1
992 620.32 temperature 25 14400 < th dose independent rect. 4 9