FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0244300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.32 (0.021) R2 : 0.0241
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.149 (0.0443) R2dN8 : 0.0311 R2N8 : 0.0241
σ : 0.396
deviance : 71.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.84 0.39 3.33 -0.0271 0.0418 0.569 -0.508 -1.46 0.173 5.57 999.1 19 -- --
68.87 0.389 3.31 0.0509 0.0425 0.308 -0.506 -- 0.173 5.58 999.2 18 -- --
69.43 0.388 3.33 -0.0352 0.0477 0.569 -- -1.46 0.174 7.72 999.1 19 -- --
69.44 0.388 3.31 0.0502 0.0489 0.309 -- -- 0.175 7.9 999.1 18 -- --
69.55 0.388 3.33 -0.0265 -- 0.565 -- -1.43 0.176 -- 999.1 18 -- --
71.03 0.395 3.32 0.0952 0.0452 -- -0.497 -- 0.156 5.6 -- -- -- --
71.59 0.396 3.32 0.0937 0.0515 -- -- -- 0.158 7.85 -- -- -- --
69.57 0.388 3.31 0.0499 -- 0.311 -- -- 0.176 -- 999.1 18 -- --
69.5 0.388 3.31 -- 0.0492 0.318 -- -- 0.17 7.85 999.2 18 -- --
71.73 0.396 3.32 0.0943 -- -- -- -- 0.159 -- -- -- -- --
71.82 0.396 3.32 -- 0.0522 -- -- -- 0.148 7.72 -- -- -- --
69.64 0.389 3.31 -- -- 0.319 -- -- 0.171 -- 999.2 18 -- --
71.97 0.396 3.32 -- -- -- -- -- 0.149 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.50 atmosphere 1005.0 90 > th dose dependent rect. 2 1
2 62.63 atmosphere 1000.0 30 > th dose independent rect. 3 23
3 62.70 temperature 20.0 30 > th dose dependent rect. 2 1
4 62.77 temperature 20.0 30 > th dose independent rect. 2 1
5 62.77 atmosphere 1005.0 30 > th dose independent rect. 2 1
12 62.84 wind 3.0 30 < th dose independent rect. 2 1
13 62.84 radiation 1.0 14400 < th dose dependent rect. 3 1
14 62.86 wind 3.0 30 < th dose dependent rect. 2 1
21 62.91 humidity 80.0 30 > th dose independent rect. 2 1
22 62.91 humidity 60.0 30 > th dose dependent rect. 2 1
26 62.92 temperature 10.0 30 > th dose independent rect. 2 1
28 62.92 temperature 30.0 30 < th dose independent rect. 2 1
29 62.92 humidity 50.0 30 > th dose independent rect. 2 1
34 62.92 atmosphere 1010.0 30 < th dose independent rect. 2 1
36 62.92 radiation 1.0 30 < th dose independent rect. 2 1
41 62.92 precipitation 0.1 30 < th dose independent rect. 2 1
42 62.92 temperature 10.0 30 > th dose independent rect. 3 23
44 62.92 radiation 1.0 30 < th dose dependent rect. 2 1
51 62.92 precipitation 0.1 30 < th dose dependent rect. 2 1
59 62.96 wind 9.0 1440 < th dose independent rect. 3 1
60 62.96 temperature 10.0 1440 > th dose independent rect. 3 1
63 62.96 temperature 30.0 1440 < th dose independent rect. 3 1
67 62.96 humidity 50.0 1440 > th dose independent rect. 3 1
76 62.96 atmosphere 995.0 1440 > th dose independent rect. 3 1
77 62.96 radiation 1.0 1440 < th dose independent rect. 3 1
97 62.96 temperature 10.0 1440 > th dose independent rect. 4 23
112 63.13 atmosphere 1015.0 30 < th dose dependent rect. 2 1
113 63.16 wind 1.0 30 > th dose independent rect. 2 1
116 63.21 temperature 30.0 30 < th dose dependent rect. 2 1
174 63.98 precipitation 0.1 30 < th dose independent rect. 3 23
175 63.98 precipitation 0.1 30 < th dose dependent rect. 3 23
185 64.67 humidity 50.0 30 > th dose independent rect. 3 23
186 64.69 wind 9.0 30 < th dose independent rect. 3 23
195 65.15 radiation 10.0 30 > th dose independent rect. 7 1
197 65.21 humidity 80.0 10 < th dose independent rect. 6 2
210 65.72 humidity 80.0 10 < th dose independent rect. 2 6
211 65.72 humidity 80.0 10 < th dose independent rect. 24 8
233 65.86 humidity 90.0 90 < th dose independent rect. 2 1
271 66.30 temperature 25.0 270 > th dose independent rect. 23 4
286 66.73 temperature 25.0 270 > th dose dependent rect. 23 4
297 66.94 wind 1.0 10 > th dose independent rect. 8 23
308 67.00 atmosphere 1000.0 30 > th dose independent rect. 8 23
316 67.06 radiation 10.0 30 < th dose dependent rect. 3 23
335 67.13 radiation 10.0 30 < th dose independent rect. 3 23
340 67.17 radiation 10.0 10 > th dose independent rect. 14 18
341 67.18 temperature 30.0 30 < th dose independent rect. 3 23
348 67.24 humidity 90.0 10 < th dose dependent rect. 7 1
368 67.42 atmosphere 995.0 30 > th dose dependent rect. 3 23
389 67.59 atmosphere 1000.0 30 > th dose independent rect. 8 18
399 67.65 humidity 90.0 90 < th dose dependent rect. 1 7
425 67.87 radiation 1.0 30 > th dose dependent rect. 7 1
444 68.04 humidity 50.0 30 > th dose dependent rect. 3 23
458 68.10 humidity 80.0 30 < th dose dependent rect. 5 3
460 68.11 atmosphere 1005.0 30 > th dose independent rect. 7 1
473 68.14 atmosphere 1015.0 30 < th dose independent rect. 3 23
481 68.16 atmosphere 1000.0 10 > th dose independent rect. 10 16
483 68.18 wind 1.0 30 > th dose independent rect. 7 1
484 68.18 wind 3.0 30 < th dose dependent rect. 2 6
509 68.20 wind 1.0 14400 < th dose dependent rect. 2 1
515 68.23 radiation 10.0 10 > th dose independent sin 12 NA
517 68.23 atmosphere 995.0 270 > th dose independent rect. 8 14
522 68.24 wind 5.0 30 < th dose independent rect. 7 1
534 68.28 atmosphere 1000.0 90 > th dose independent rect. 3 10
539 68.29 humidity 80.0 10 < th dose dependent rect. 24 8
540 68.30 atmosphere 995.0 720 > th dose independent rect. 8 7
551 68.34 humidity 90.0 90 < th dose dependent rect. 2 1
562 68.36 radiation 20.0 10 < th dose dependent rect. 12 14
565 68.37 atmosphere 995.0 30 > th dose dependent rect. 8 23
567 68.38 atmosphere 995.0 30 > th dose dependent rect. 7 1
568 68.38 atmosphere 1000.0 10 < th dose dependent rect. 16 2
573 68.39 atmosphere 1000.0 10 < th dose independent rect. 16 3
574 68.39 atmosphere 995.0 720 > th dose independent rect. 15 8
575 68.39 atmosphere 1015.0 90 < th dose independent rect. 13 14
577 68.39 humidity 80.0 14400 < th dose dependent rect. 3 6
579 68.40 wind 9.0 1440 < th dose independent rect. 8 1
582 68.40 temperature 10.0 1440 > th dose independent rect. 8 1
587 68.40 humidity 50.0 1440 > th dose independent rect. 8 1
589 68.40 atmosphere 995.0 1440 > th dose independent rect. 8 1
592 68.40 atmosphere 1015.0 1440 < th dose independent rect. 8 1
594 68.40 wind 9.0 90 < th dose independent rect. 13 14
595 68.40 atmosphere 995.0 720 > th dose independent rect. 11 16
597 68.40 temperature 10.0 1440 > th dose independent rect. 9 23
602 68.41 precipitation 0.1 30 < th dose independent rect. 7 1
621 68.41 precipitation 0.1 30 < th dose dependent rect. 7 1
627 68.41 temperature 25.0 270 < th dose dependent rect. 4 3
629 68.41 humidity 80.0 14400 < th dose dependent rect. 20 14
631 68.42 wind 1.0 14400 < th dose independent rect. 2 1
639 68.42 wind 9.0 30 < th dose dependent rect. 3 23
641 68.43 temperature 10.0 30 > th dose independent rect. 7 1
643 68.43 temperature 30.0 30 < th dose independent rect. 7 1
644 68.43 humidity 50.0 30 > th dose independent rect. 7 1
646 68.43 atmosphere 995.0 30 > th dose independent rect. 7 1
647 68.43 atmosphere 1015.0 30 < th dose independent rect. 7 1
652 68.43 temperature 10.0 30 > th dose independent rect. 8 23
671 68.44 atmosphere 1000.0 720 > th dose independent rect. 3 8
672 68.44 wind 1.0 10 < th dose independent rect. 11 16
685 68.45 wind 9.0 10 < th dose dependent rect. 7 1
698 68.47 wind 1.0 10 < th dose independent rect. 2 5
701 68.47 atmosphere 1000.0 90 < th dose dependent rect. 6 21
703 68.48 temperature 25.0 30 > th dose independent rect. 7 1
706 68.48 temperature 30.0 4320 < th dose independent rect. 3 6
712 68.48 temperature 10.0 90 > th dose dependent rect. 3 10
713 68.48 wind 3.0 30 < th dose dependent rect. 2 11
739 68.51 temperature 20.0 270 < th dose independent rect. 5 2
752 68.52 radiation 10.0 10 > th dose dependent rect. 15 17
755 68.53 radiation 30.0 10 < th dose independent rect. 14 12
777 68.54 precipitation 0.1 30 < th dose independent rect. 8 23
778 68.54 radiation 10.0 10 > th dose dependent sin 12 NA
783 68.54 precipitation 0.1 30 < th dose dependent rect. 8 23
791 68.56 temperature 10.0 90 > th dose independent rect. 3 10
793 68.56 atmosphere 1015.0 90 < th dose independent rect. 3 10
794 68.56 temperature 10.0 90 > th dose independent rect. 13 14
804 68.57 radiation 40.0 30 < th dose independent rect. 7 1
805 68.57 wind 1.0 10 < th dose independent rect. 6 21
807 68.57 atmosphere 995.0 270 > th dose independent rect. 14 23
812 68.57 humidity 80.0 10 < th dose dependent rect. 20 12
816 68.58 wind 9.0 4320 < th dose independent rect. 3 6
818 68.58 atmosphere 1000.0 10 > th dose independent rect. 2 14
820 68.58 temperature 10.0 30 > th dose dependent rect. 7 1
829 68.59 wind 9.0 30 < th dose independent rect. 8 23
839 68.60 atmosphere 1000.0 10 > th dose independent rect. 10 14
842 68.60 atmosphere 1000.0 10 > th dose independent rect. 11 23
851 68.61 radiation 20.0 720 > th dose independent rect. 15 1
854 68.61 wind 9.0 720 < th dose independent rect. 15 17
855 68.61 atmosphere 1000.0 30 > th dose independent rect. 10 21
856 68.61 temperature 30.0 30 < th dose dependent rect. 7 1
863 68.62 atmosphere 1000.0 90 > th dose independent rect. 10 13
869 68.62 wind 1.0 30 > th dose independent rect. 3 23
874 68.62 atmosphere 1000.0 90 < th dose dependent rect. 6 13
875 68.62 radiation 10.0 10 < th dose dependent rect. 8 18
879 68.63 wind 9.0 90 < th dose independent rect. 3 10
893 68.64 atmosphere 995.0 720 > th dose independent rect. 3 17
925 68.66 atmosphere 995.0 30 > th dose dependent rect. 8 18
926 68.67 wind 1.0 14400 > th dose independent rect. 2 1
927 68.67 humidity 70.0 4320 > th dose independent rect. 11 1
932 68.67 atmosphere 1000.0 90 < th dose dependent rect. 6 15
934 68.68 humidity 70.0 4320 < th dose independent rect. 11 1
943 68.68 wind 1.0 4320 < th dose dependent rect. 20 2
949 68.69 precipitation 0.1 90 < th dose independent rect. 3 10
960 68.69 precipitation 0.1 90 < th dose dependent rect. 3 10
973 68.71 precipitation 0.1 1440 < th dose independent rect. 8 1
976 68.71 radiation 20.0 10 < th dose independent rect. 12 14
977 68.71 atmosphere 995.0 720 > th dose independent rect. 23 16
980 68.71 precipitation 0.1 1440 < th dose dependent rect. 8 1
991 68.71 atmosphere 1000.0 10 < th dose dependent rect. 14 21
999 68.72 precipitation 0.1 90 < th dose independent rect. 13 14