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Os11g0242800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ASCAB9-A (ASCAB9-B) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.5 (0.0367) R2 : 0.893
β1 : -1.71 (0.136) R2dD : 0.0382 R2D : 0.0235
β2 : -- (--) R2dC : -- R2C : --
β3 : -6.39 (0.112) R2dE : 0.783 R2E : 0.824
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -3.36 (0.563) R2dD*E : 0.00854 R2D*E : 0.00187
γ1 : -0.948 (0.0787) R2dN8 : 0.0439 R2N8 : 0.0439
σ : 0.684
deviance : 215.53
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 13.99
memory length : 206
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 19.3
open length of G : 6.95

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
191.68 0.65 15.5 -1.59 0.857 -5.91 2.62 0.164 -0.873 10.8 15.55 228 19.2 6.85
187.2 0.637 15.5 -1.64 0.916 -5.79 2.7 -- -0.87 10.8 15.39 203 19.5 6.72
205.91 0.668 15.5 -1.73 0.846 -5.77 -- -1.86 -0.962 9.83 14.52 195 19.5 6.92
214.61 0.682 15.5 -1.51 0.946 -5.91 -- -- -0.853 10.4 15.74 202 19.5 6.75
215.53 0.684 15.5 -1.71 -- -6.39 -- -3.36 -0.948 -- 13.99 206 19.3 6.95
657.42 1.2 15.5 -1.99 4.21 -- 3.52 -- -1.23 12 -- -- -- --
711.13 1.25 15.5 -1.85 4.2 -- -- -- -1.21 12 -- -- -- --
231.65 0.709 15.5 -1.57 -- -6.4 -- -- -0.896 -- 14.06 211 19.2 6.97
273.69 0.771 15.4 -- 0.837 -6.08 -- -- -0.663 10.1 15.73 201 19.5 6.8
1821.69 1.99 15.6 -1.98 -- -- -- -- -1.27 -- -- -- -- --
801.6 1.32 15.5 -- 4.22 -- -- -- -1.01 12 -- -- -- --
289.22 0.792 15.5 -- -- -6.67 -- -- -0.681 -- 14.93 215 19.2 6.97
1925.42 2.05 15.5 -- -- -- -- -- -1.05 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 205.84 temperature 15.0 270 > th dose dependent rect. 19 7
3 221.09 temperature 15.0 270 > th dose dependent rect. 20 5
21 262.55 temperature 20.0 90 > th dose independent rect. 20 7
32 274.28 temperature 20.0 10 > th dose dependent rect. 22 5
65 300.87 temperature 20.0 10 > th dose independent rect. 22 5
88 311.31 temperature 20.0 90 > th dose independent rect. 9 18
166 356.40 atmosphere 1010.0 90 < th dose independent rect. 20 7
183 369.60 atmosphere 1015.0 90 < th dose independent rect. 9 18
189 372.02 atmosphere 1015.0 270 < th dose independent rect. 7 18
198 375.42 radiation 20.0 90 < th dose independent rect. 3 6
199 375.47 precipitation 0.1 90 < th dose independent rect. 3 6
200 375.47 precipitation 0.1 90 < th dose dependent rect. 3 6
205 377.26 radiation 40.0 90 < th dose independent rect. 3 6
206 377.47 wind 7.0 90 < th dose independent rect. 3 6
207 377.51 wind 9.0 90 < th dose dependent rect. 3 6
209 377.92 humidity 60.0 90 > th dose independent rect. 3 6
211 378.15 temperature 10.0 90 > th dose independent rect. 3 6
214 378.15 atmosphere 995.0 90 > th dose independent rect. 3 6
215 378.15 atmosphere 1015.0 90 < th dose independent rect. 3 6
221 378.66 temperature 30.0 90 < th dose independent rect. 3 6
229 380.81 radiation 40.0 90 < th dose dependent rect. 3 6
231 381.20 humidity 50.0 90 > th dose dependent rect. 3 6
235 381.52 wind 9.0 90 < th dose independent rect. 9 18
240 382.75 precipitation 0.1 270 < th dose independent rect. 1 6
241 382.75 precipitation 0.1 270 < th dose dependent rect. 1 6
256 384.00 wind 7.0 270 < th dose independent rect. 1 6
266 384.73 humidity 70.0 270 > th dose independent rect. 1 6
269 385.24 temperature 10.0 270 > th dose independent rect. 1 6
271 385.24 temperature 30.0 270 < th dose independent rect. 1 6
272 385.24 humidity 50.0 270 > th dose independent rect. 1 6
274 385.24 atmosphere 995.0 270 > th dose independent rect. 1 6
275 385.24 atmosphere 1015.0 270 < th dose independent rect. 1 6
284 386.29 temperature 10.0 270 > th dose dependent rect. 2 5
289 386.86 humidity 80.0 90 > th dose independent rect. 20 7
302 387.39 wind 9.0 270 < th dose independent rect. 7 18
307 388.13 precipitation 0.1 270 < th dose independent rect. 3 2
308 388.13 precipitation 0.1 270 < th dose dependent rect. 3 2
311 388.65 radiation 1.0 270 < th dose dependent rect. 3 2
316 389.20 wind 7.0 270 < th dose independent rect. 3 2
318 389.33 radiation 1.0 270 < th dose independent rect. 3 2
328 389.95 temperature 10.0 270 > th dose independent rect. 3 2
330 389.95 temperature 30.0 270 < th dose independent rect. 3 2
331 389.95 humidity 50.0 270 > th dose independent rect. 3 2
334 389.95 atmosphere 995.0 270 > th dose independent rect. 3 2
335 389.95 atmosphere 1010.0 270 < th dose independent rect. 3 2
340 389.95 temperature 10.0 270 > th dose independent rect. 5 22
346 390.77 temperature 10.0 270 > th dose dependent rect. 3 2
347 390.89 wind 9.0 90 < th dose dependent rect. 20 7
361 392.64 precipitation 0.1 270 < th dose independent rect. 2 17
362 392.64 precipitation 0.1 270 < th dose dependent rect. 2 17
381 394.53 humidity 50.0 270 > th dose dependent rect. 3 2
408 395.34 wind 5.0 270 < th dose independent rect. 18 8
413 396.14 radiation 1.0 270 < th dose dependent rect. 18 8
415 396.30 humidity 60.0 270 > th dose independent rect. 19 7
417 396.41 wind 9.0 270 < th dose independent rect. 5 22
425 396.69 temperature 30.0 270 < th dose independent rect. 19 7
427 396.69 atmosphere 995.0 270 > th dose independent rect. 19 7
428 396.69 radiation 1.0 270 < th dose independent rect. 19 7
433 396.69 temperature 10.0 270 > th dose independent rect. 2 17
434 396.69 atmosphere 1015.0 270 < th dose independent rect. 2 17
439 396.70 precipitation 0.1 90 < th dose independent rect. 9 18
440 396.70 precipitation 0.1 90 < th dose dependent rect. 9 18
442 396.90 wind 9.0 270 < th dose independent rect. 19 7
445 396.96 wind 5.0 90 < th dose independent rect. 20 7
447 397.37 wind 9.0 270 < th dose independent rect. 2 17
449 397.44 temperature 10.0 10 > th dose dependent rect. 9 18
481 398.12 temperature 10.0 90 > th dose dependent rect. 9 18
484 398.32 atmosphere 995.0 90 > th dose independent rect. 9 18
490 398.49 precipitation 0.1 90 < th dose independent rect. 20 7
491 398.49 precipitation 0.1 90 < th dose dependent rect. 20 7
497 398.84 humidity 50.0 90 > th dose dependent rect. 20 7
534 400.76 wind 9.0 270 < th dose dependent rect. 3 2
541 401.22 precipitation 0.1 270 < th dose independent rect. 7 18
542 401.22 precipitation 0.1 270 < th dose dependent rect. 7 18
551 401.72 atmosphere 995.0 270 > th dose independent rect. 7 18
612 404.19 precipitation 0.1 270 < th dose independent rect. 14 16
613 404.19 precipitation 0.1 270 < th dose dependent rect. 14 16
626 405.30 wind 1.0 270 > th dose independent rect. 19 7
644 406.14 radiation 30.0 10 < th dose independent rect. 3 6
669 407.47 wind 1.0 270 > th dose independent rect. 1 6
678 407.83 temperature 10.0 270 > th dose independent rect. 6 8
679 407.83 atmosphere 995.0 270 > th dose independent rect. 6 8
680 407.83 atmosphere 1015.0 270 < th dose independent rect. 6 8
681 407.83 temperature 10.0 270 > th dose independent rect. 14 16
685 408.10 precipitation 0.1 270 < th dose independent rect. 6 8
686 408.10 precipitation 0.1 270 < th dose dependent rect. 6 8
704 408.79 wind 9.0 270 < th dose independent rect. 14 16
726 409.63 wind 9.0 270 < th dose independent rect. 6 8
747 410.61 radiation 40.0 270 < th dose independent rect. 14 16
817 412.69 atmosphere 995.0 270 > th dose dependent rect. 3 2
826 413.49 precipitation 0.1 10 < th dose independent rect. 9 18
827 413.49 precipitation 0.1 10 < th dose dependent rect. 9 18
857 414.83 wind 1.0 270 > th dose independent rect. 7 18
861 415.19 atmosphere 995.0 90 > th dose dependent rect. 3 6
863 415.45 wind 1.0 270 > th dose independent rect. 2 4
867 415.61 atmosphere 1010.0 10 < th dose independent rect. 22 5
877 416.12 radiation 1.0 270 < th dose dependent rect. 6 20
894 416.54 precipitation 0.1 270 < th dose independent rect. 1 20
895 416.54 precipitation 0.1 270 < th dose dependent rect. 1 20
899 416.82 atmosphere 1015.0 270 < th dose independent rect. 21 15
950 417.62 atmosphere 995.0 90 > th dose independent rect. 3 17
974 419.27 wind 9.0 90 < th dose dependent rect. 9 18
998 420.07 wind 1.0 270 > th dose independent rect. 3 2