Os11g0240900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0240900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.87 | 0.277 | 9.99 | 1.47 | 1.33 | 0.644 | -0.0909 | -0.633 | 0.343 | 16.9 | 80 | 1331 | -- | -- |
| 35.25 | 0.277 | 9.99 | 1.43 | 1.32 | 0.628 | -0.126 | -- | 0.332 | 17 | 80.75 | 1314 | -- | -- |
| 34.87 | 0.275 | 9.99 | 1.47 | 1.33 | 0.639 | -- | -0.652 | 0.343 | 17 | 80.37 | 1310 | -- | -- |
| 35.22 | 0.276 | 9.99 | 1.4 | 1.32 | 0.607 | -- | -- | 0.329 | 17 | 81.1 | 1314 | -- | -- |
| 112.4 | 0.496 | 9.99 | 1.34 | -- | -0.491 | -- | -0.116 | 0.262 | -- | 80.37 | 1310 | -- | -- |
| 40.12 | 0.297 | 10 | 1.4 | 1.38 | -- | -0.0701 | -- | 0.294 | 16.9 | -- | -- | -- | -- |
| 40.13 | 0.297 | 10 | 1.4 | 1.38 | -- | -- | -- | 0.294 | 16.9 | -- | -- | -- | -- |
| 112.49 | 0.496 | 9.99 | 1.34 | -- | -0.491 | -- | -- | 0.261 | -- | 80.37 | 1310 | -- | -- |
| 84.94 | 0.429 | 10 | -- | 1.32 | 0.704 | -- | -- | 0.316 | 17 | 84.01 | 2770 | -- | -- |
| 140 | 0.553 | 9.99 | 1.35 | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
| 92.08 | 0.449 | 10 | -- | 1.35 | -- | -- | -- | 0.137 | 16.9 | -- | -- | -- | -- |
| 159.82 | 0.591 | 10 | -- | -- | -0.499 | -- | -- | 0.113 | -- | 80.37 | 1310 | -- | -- |
| 188.28 | 0.64 | 10 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.69 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 2 |
| 4 | 32.85 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 6 | 33.13 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 14 | 33.48 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 15 | 33.55 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 16 | 33.57 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 25 | 33.75 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 27 | 33.77 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 62 | 34.05 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 12 |
| 72 | 34.12 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 82 | 34.23 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 96 | 34.28 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 20 | 19 |
| 106 | 34.36 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 116 | 34.40 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 122 | 34.42 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 127 | 34.44 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 136 | 34.46 | humidity | 80.0 | 720 | > th | dose independent | sin | 11 | NA |
| 161 | 34.55 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 165 | 34.58 | humidity | 80.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 177 | 34.61 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 179 | 34.62 | wind | 5.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 183 | 34.65 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 188 | 34.66 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 220 | 34.73 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 223 | 34.74 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 238 | 34.76 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 248 | 34.79 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 19 | 13 |
| 266 | 34.82 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 277 | 34.84 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 295 | 34.89 | humidity | 80.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 329 | 34.96 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 367 | 35.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 369 | 35.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 372 | 35.04 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 373 | 35.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 430 | 35.12 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 450 | 35.14 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 474 | 35.17 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 502 | 35.21 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 509 | 35.22 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 521 | 35.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 524 | 35.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 539 | 35.24 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 577 | 35.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 601 | 35.31 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 619 | 35.32 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 623 | 35.32 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 628 | 35.33 | humidity | 80.0 | 720 | < th | dose independent | sin | 12 | NA |
| 629 | 35.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 635 | 35.33 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 649 | 35.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 654 | 35.35 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 667 | 35.36 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 670 | 35.36 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 676 | 35.36 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 686 | 35.37 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 687 | 35.37 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 688 | 35.37 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 689 | 35.37 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 23 | 5 |
| 720 | 35.39 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 741 | 35.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 756 | 35.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 23 |
| 766 | 35.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 808 | 35.45 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 814 | 35.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 815 | 35.46 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 830 | 35.46 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 845 | 35.47 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 4 |
| 952 | 35.53 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 971 | 35.53 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 983 | 35.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 994 | 35.55 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |